RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CT45A5P0DMU8 189 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 CT45A7P0DMV0 189 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 RBMS2Q15434 407 aaKnown RBP9.6□□□□□ -0.87
PVT1-215ENST00000522963 Q6YL49 198 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 ZNF383Q8NA42 475 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 DRAXINQ8NBI3 349 aaPredicted RBP9.6□□□□□ -0.87
PVT1-215ENST00000522963 ZBTB34Q8NCN2 500 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 ZFAND1Q8TCF1 268 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 TAF15Q92804 592 aaKnown RBP eCLIP9.6□□□□□ -0.878e-6■□□□□ 10.8
PVT1-215ENST00000522963 NABP2Q9BQ15 211 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 SLC25A21Q9BQT8 299 aaPredicted RBP9.6□□□□□ -0.87
PVT1-215ENST00000522963 RTBDNQ9BSG5 229 aaPredicted RBP9.6□□□□□ -0.87
PVT1-215ENST00000522963 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 DPAGT1Q9H3H5 408 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 FLVCR2Q9UPI3 526 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 CUBNO60494 3623 aa9.6□□□□□ -0.87
PVT1-215ENST00000522963 TIMM23O14925 209 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 PGLYRP1O75594 196 aaPredicted RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 IGHV4-59P01825 116 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 TCRBP04435 133 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 RND3P61587 244 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 RPL30P62888 115 aaKnown RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 GLDNQ6ZMI3 551 aaPredicted RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 ZNF66Q6ZN08 573 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 OR8H3Q8N146 312 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 ADAD2Q8NCV1 583 aaKnown RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 ENKURQ8TC29 256 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 ZNF486Q96H40 463 aaPredicted RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 SCGB3A2Q96PL1 93 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
PVT1-215ENST00000522963 C14orf166Q9Y224 244 aaKnown RBP9.59□□□□□ -0.87
PVT1-215ENST00000522963 IGHV3-72A0A0B4J1Y9 119 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 LINC00473A8K010 186 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 ARPC1BO15143 372 aaKnown RBP9.58□□□□□ -0.88
PVT1-215ENST00000522963 TXNL1O43396 289 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 RLN1P04808 185 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 SPNP16150 400 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 THBS3P49746 956 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 PIGPP57054 158 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 ABCA11PQ4W5N1 156 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 CCDC144NLQ6NUI1 221 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 TMED4Q7Z7H5 227 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 CMTM1Q8IZ96 169 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 DUSP18Q8NEJ0 188 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 TCTEX1D2Q8WW35 142 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 SSMEM1Q8WWF3 244 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 DDB2Q92466 427 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 CFHR4Q92496 578 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 TMEM230Q96A57 120 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 HSD17B10Q99714 261 aaKnown RBP9.58□□□□□ -0.88
PVT1-215ENST00000522963 C20orf85Q9H1P6 137 aa9.58□□□□□ -0.88
PVT1-215ENST00000522963 FBN1P35555 2871 aaKnown RBP9.57□□□□□ -0.88
PVT1-215ENST00000522963 VGLL3A8MV65 326 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 H0YJW9 148 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 MPPED1O15442 326 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 CRYBA1P05813 215 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
PVT1-215ENST00000522963 CD24P25063 80 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 S100GP29377 79 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 IER3P46695 156 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 RAB13P51153 203 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 HABP2Q14520 560 aaPredicted RBP9.57□□□□□ -0.88
PVT1-215ENST00000522963 FBLN7Q53RD9 439 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 C12orf54Q6X4T0 127 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 KCTD9Q7L273 389 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 OR51H1Q8NH63 302 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 ADTRPQ96IZ2 230 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 CHIAQ9BZP6 476 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 PRDM13Q9H4Q3 707 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 NUDT15Q9NV35 164 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 COPZ2Q9P299 210 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 NUBP2Q9Y5Y2 271 aa9.57□□□□□ -0.88
PVT1-215ENST00000522963 TRAV6A0A075B6T7 132 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 CRYM-AS1A6NIL9 109 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 FAM90A9PA6NNJ1 464 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 CLDN34H7C241 214 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 PTTG1O95997 202 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 H2AFB2P0C5Z0 115 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 ANXA7P20073 488 aaKnown RBP9.56□□□□□ -0.88
PVT1-215ENST00000522963 CD1BP29016 333 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 DYNLT3P51808 116 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 ARHGDIBP52566 201 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 LY6EQ16553 131 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 RGS21Q2M5E4 152 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 LRRC75BQ2VPJ9 315 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 OR2B11Q5JQS5 317 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 SLC25A42Q86VD7 318 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 CENPSQ8N2Z9 138 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 CCDC71LQ8N9Z2 235 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms