RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 C1orf174Q8IYL3 243 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 CYB561D1Q8N8Q1 229 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 LSM10Q969L4 123 aaKnown RBP8.53□□□□□ -1.04
MCF2-209ENST00000520602 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 ZNF737O75373 536 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 NQO2P16083 231 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 CD40P25942 277 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
MCF2-209ENST00000520602 LRRC10Q5BKY1 277 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 NCR3LG1Q68D85 454 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 LILRB1Q8NHL6 650 aaPredicted RBP8.53□□□□□ -1.04
MCF2-209ENST00000520602 RHOVQ96L33 236 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 TRAV38-1A0A0B4J264 116 aa8.52□□□□□ -1.04
MCF2-209ENST00000520602 SCAF4O95104 1147 aaKnown RBP8.52□□□□□ -1.04
MCF2-209ENST00000520602 IGKV3-15P01624 115 aa8.52□□□□□ -1.04
MCF2-209ENST00000520602 ZNF474Q6S9Z5 364 aaPredicted RBP8.52□□□□□ -1.04
MCF2-209ENST00000520602 RPRMQ9NS64 109 aa8.52□□□□□ -1.04
MCF2-209ENST00000520602 TLN1Q9Y490 2541 aaKnown RBP8.52□□□□□ -1.05
MCF2-209ENST00000520602 H3BQ15 152 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 IFNL4K9M1U5 179 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 HRASP01112 189 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 MBP02144 154 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 KIAA0141Q14154 515 aaPredicted RBP8.52□□□□□ -1.05
MCF2-209ENST00000520602 NMSQ5H8A3 153 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 Q6ZRM9 215 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 FAM216BQ8N7L0 139 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 FAM57AQ8TBR7 257 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 SSMEM1Q8WWF3 244 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 MRPL37Q9BZE1 423 aaKnown RBP8.52□□□□□ -1.05
MCF2-209ENST00000520602 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 SLC25A15Q9Y619 301 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 IGF2RP11717 2491 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 FRYLO94915 3013 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 DNASE2O00115 360 aaPredicted RBP8.52□□□□□ -1.05
MCF2-209ENST00000520602 LYL1P12980 280 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 HNF1AP20823 631 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 NDUFA6P56556 154 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 LRFN3Q9BTN0 628 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 KIAA1456Q9P272 454 aa8.52□□□□□ -1.05
MCF2-209ENST00000520602 STUMQ69YW2 141 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 ZNF66Q6ZN08 573 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 PATZ1Q9HBE1 687 aaKnown RBP8.51□□□□□ -1.05
MCF2-209ENST00000520602 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
MCF2-209ENST00000520602 K7EM74 188 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 CD55P08174 381 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 EGR1P18146 543 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 SNRPEP62304 92 aaKnown RBP8.51□□□□□ -1.05
MCF2-209ENST00000520602 RPL30P62888 115 aaKnown RBP8.51□□□□□ -1.05
MCF2-209ENST00000520602 CCL20P78556 96 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 IL15RAQ13261 267 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 Q6ZR03 302 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 TMEM171Q8WVE6 324 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 FRZBQ92765 325 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 TAF15Q92804 592 aaKnown RBP eCLIP8.51□□□□□ -1.05
MCF2-209ENST00000520602 LURAP1Q96LR2 239 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 CABLES2Q9BTV7 478 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 MYO15AQ9UKN7 3530 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 WNK2Q9Y3S1 2297 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 TNFSF13O75888 250 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 HPRT1P00492 218 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 MT-ND4LP03901 98 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
MCF2-209ENST00000520602 CD177Q8N6Q3 437 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 COQ2Q96H96 371 aa8.51□□□□□ -1.05
MCF2-209ENST00000520602 CD3EP07766 207 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 GNB1P62873 340 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 DLK1P80370 383 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 ATP6V1FQ16864 119 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 HFEQ30201 348 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 Q6ZS49 121 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 Q6ZS92 163 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 ACY3Q96HD9 319 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 GAL3ST2Q9H3Q3 398 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
MCF2-209ENST00000520602 PPIAL4EA0A075B759 164 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 PPIAL4DF5H284 164 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 RAB29O14966 203 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 TMEM50AO95807 157 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 PPIAL4FP0DN26 164 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 CA5BP1Q8WTZ4 195 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 GAB2Q9UQC2 676 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 PPIAL4AQ9Y536 164 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 H7BYZ3 331 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 CCL21O00585 134 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 CDC34P49427 236 aaPredicted RBP8.5□□□□□ -1.05
MCF2-209ENST00000520602 RAB13P51153 203 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 BSPH1Q075Z2 132 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 QTRT1Q9BXR0 403 aaKnown RBP8.5□□□□□ -1.05
MCF2-209ENST00000520602 WDFY4Q6ZS81 3184 aa8.5□□□□□ -1.05
MCF2-209ENST00000520602 MBD3L4A6NDZ8 208 aaPredicted RBP8.49□□□□□ -1.05
MCF2-209ENST00000520602 MBD3L3A6NE82 208 aaPredicted RBP8.49□□□□□ -1.05
MCF2-209ENST00000520602 MBD3L5A6NJ08 208 aaPredicted RBP8.49□□□□□ -1.05
MCF2-209ENST00000520602 COX7A1P24310 79 aa8.49□□□□□ -1.05
MCF2-209ENST00000520602 MST1LQ2TV78 715 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms