RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF208O43345 1280 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 LATO43561 262 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 GMFGO60234 142 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 MMP23AO75900 390 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARL6IP5O75915 188 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRGC2P03986 189 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CD3DP04234 171 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CD55P08174 381 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4A8P0C604 315 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRGC1P0CF51 173 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 AKAIN1P0CW23 69 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 LIPCP11150 499 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TDGF1P13385 188 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CPMP14384 443 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 FABP4P15090 132 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 FUT1P19526 365 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 BCKDHBP21953 392 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CD82P27701 267 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PSMB5P28074 263 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PEBP1P30086 187 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACAA2P42765 397 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CX3CR1P49238 355 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 IDH3GP51553 393 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 EFNB2P52799 333 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM33P57088 247 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TAS2R19P59542 299 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTBP60709 375 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTA2P62736 377 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTG1P63261 375 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTG2P63267 376 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTC1P68032 377 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTA1P68133 377 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 BTN3A2P78410 334 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 RHOGP84095 191 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PAX5Q02548 391 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CST6Q15828 149 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM176BQ3YBM2 270 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SCGB2B2Q4G0G5 96 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 NKAIN1Q4KMZ8 207 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 MORN2Q502X0 79 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 BEX5Q5H9J7 111 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 NCR3LG1Q68D85 454 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ASPHD2Q6ICH7 369 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2T2Q6IF00 324 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 EIF5AL1Q6IS14 154 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 UFSP1Q6NVU6 142 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL22L1Q6P5R6 122 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRSS54Q6PEW0 395 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARL9Q6T311 187 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF836Q6ZNA1 936 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TEX43Q6ZNM6 134 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35D2Q76EJ3 337 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 LYG2Q86SG7 212 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 WDFY1Q8IWB7 410 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 NRMQ8IXM6 262 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 H1FOOQ8IZA3 346 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 GABRG1Q8N1C3 465 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 LRRC25Q8N386 305 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 C2orf73Q8N5S3 287 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF283Q8N7M2 679 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZDHHC22Q8N966 263 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR8G5Q8NG78 346 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2M7Q8NG81 312 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR51A2Q8NGJ7 313 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4C6Q8NH72 309 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SYNPRQ8TBG9 265 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CASTOR1Q8WTX7 329 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TNFAIP8L1Q8WVP5 186 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM239Q8WW34 195 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 AQP3Q92482 292 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CDS1Q92903 461 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 FGF13Q92913 245 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TNFRSF14Q92956 283 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ELSPBP1Q96BH3 223 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CMBLQ96DG6 245 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CPNE2Q96FN4 548 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 S100A16Q96FQ6 103 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 WFIKKN1Q96NZ8 548 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPX7Q96SL4 187 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 NRTNQ99748 197 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC6A7Q99884 636 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 MICU1Q9BPX6 476 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SULT4A1Q9BR01 284 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAAP24Q9BTP7 215 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ANGPTL4Q9BY76 406 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CHRNA10Q9GZZ6 450 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 MAGT1Q9H0U3 335 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CST11Q9H112 138 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35B3Q9H1N7 401 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ATG5Q9H1Y0 275 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR52D1Q9H346 318 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 EXO5Q9H790 373 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 NGBQ9NPG2 151 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 YAE1D1Q9NRH1 226 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CBLN4Q9NTU7 201 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ANAPC11Q9NYG5 84 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 SMPXQ9UHP9 88 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms