RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 GNMTQ14749 295 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 CDK10Q15131 360 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 P2RY14Q15391 338 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 HMGN3Q15651 99 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 USF2Q15853 346 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-215ENST00000519474 TMEM30BQ3MIR4 351 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OXLD1Q5BKU9 147 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 CD200R1LQ6Q8B3 271 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 ZNF767PQ75MW2 155 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OR2W3Q7Z3T1 314 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OR4F17Q8NGA8 305 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OR10J5Q8NHC4 309 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 FAM3DQ96BQ1 224 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 GALMQ96C23 342 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 RITA1Q96K30 269 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 OR4F4Q96R69 305 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 ABCG5Q9H222 651 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 PLEKHJ1Q9NW61 149 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 TSSC4Q9Y5U2 329 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-215ENST00000519474 V9GY05 133 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 TRBV6-6A0A0A6YYG2 114 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 TRDV1A0A1B0GX56 115 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 NCBP2LA6PVI3 153 aaKnown RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 MOSP00540 346 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 IL3RAP26951 378 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 VEGFCP49767 419 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 TBCEQ15813 527 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 PNLIPRP3Q17RR3 467 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 MOGAT2Q3SYC2 334 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 KPRPQ5T749 579 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 SSX9Q7RTT3 188 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 SMIM15Q7Z3B0 74 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 TGIF2LXQ8IUE1 241 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 OR5H6Q8NGV6 325 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 MITD1Q8WV92 249 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 S1PR3Q99500 378 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 NABP2Q9BQ15 211 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 HDHD3Q9BSH5 251 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 PECRQ9BY49 303 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 YTHDF1Q9BYJ9 559 aaKnown RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-215ENST00000519474 AK3Q9UIJ7 227 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 JPT1Q9UK76 154 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 HSF4Q9ULV5 492 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
HDAC3-215ENST00000519474 A0A075B6Q4 140 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 TRAV1-2A0A0B4J238 106 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 TMEM272A0A1B0GTI8 110 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 PSMB11A5LHX3 300 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 SERPINE3A8MV23 424 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 MRPS14O60783 128 aaKnown RBP7.36□□□□□ -1.23
HDAC3-215ENST00000519474 PROP1O75360 226 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-215ENST00000519474 GSTP1P09211 210 aaKnown RBP7.36□□□□□ -1.23
HDAC3-215ENST00000519474 SCTP09683 121 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 OR10A3P58181 314 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 RAB11BQ15907 218 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 C18orf65Q6ZTR6 163 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 ZNF367Q7RTV3 350 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 SLC35E3Q7Z769 313 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 OR4X2Q8NGF9 303 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 AGMATQ9BSE5 352 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 C2orf88Q9BSF0 95 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 Q9N2K0 584 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 LIN7CQ9NUP9 197 aaKnown RBP7.36□□□□□ -1.23
HDAC3-215ENST00000519474 STEAP1Q9UHE8 339 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 RAB22AQ9UL26 194 aa7.36□□□□□ -1.23
HDAC3-215ENST00000519474 RGS11O94810 467 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 DIRAS3O95661 229 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 CNTFRP26992 372 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 G0S2P27469 103 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 GPX4P36969 197 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-215ENST00000519474 CEACAM6P40199 344 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 GPR12P47775 334 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 UBE2UQ5VVX9 321 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 ZNF833PQ6ZTB9 187 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 NR2C2APQ86WQ0 139 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 STPG2Q8N412 459 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 FAM71E2Q8N5Q1 922 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 IL1F10Q8WWZ1 152 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 RASL11BQ9BPW5 248 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 ABHD14AQ9BUJ0 271 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 PARP12Q9H0J9 701 aaKnown RBP7.35□□□□□ -1.23
HDAC3-215ENST00000519474 ZFP57Q9NU63 452 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 ABRACLQ9P1F3 81 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 DAPK2Q9UIK4 370 aa7.35□□□□□ -1.23
HDAC3-215ENST00000519474 IGKV1-6A0A0C4DH72 117 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 IFITM5A6NNB3 132 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 RAB27BO00194 218 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 PDCD5O14737 125 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 TCAPO15273 167 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms