RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ZNF701M0R085 212 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-217ENST00000518538 PPYP01298 95 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 IGKV1-16P04430 117 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 DUTP33316 252 aaKnown RBP17.38■□□□□ 0.37
VEGFA-217ENST00000518538 RCVRNP35243 200 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 C5orf64Q2M2E5 130 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 OVCH2Q7RTZ1 564 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 OR5AU1Q8NGC0 362 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 OR5H2Q8NGV7 314 aa17.38■□□□□ 0.37
VEGFA-217ENST00000518538 FLYWCH2Q96CP2 140 aaKnown RBP17.38■□□□□ 0.37
VEGFA-217ENST00000518538 RBMX2Q9Y388 322 aaKnown RBP17.38■□□□□ 0.37
VEGFA-217ENST00000518538 M0QZ24 198 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 RRHO14718 337 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 IGLV2-14P01704 120 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 HLA-DRB1P01911 266 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 RRASP10301 218 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 CD28P10747 220 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 DYRK1AQ13627 763 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 RTL8BQ17RB0 113 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 PRR31Q5SQ13 230 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 LYSMD2Q8IV50 215 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 CHPT1Q8WUD6 406 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 DDB2Q92466 427 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 NOL4LQ96MY1 436 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-217ENST00000518538 TSNAXQ99598 290 aaKnown RBP17.37■□□□□ 0.37
VEGFA-217ENST00000518538 HSPB9Q9BQS6 159 aa17.37■□□□□ 0.37
VEGFA-217ENST00000518538 C6orf62Q9GZU0 229 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-217ENST00000518538 ZNF107Q9UII5 783 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-217ENST00000518538 LINC01548A6NM66 108 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 AP4M1O00189 453 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 SPDEFO95238 335 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 PMP2P02689 132 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 RFX2P48378 723 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 RPS16P62249 146 aaKnown RBP17.36■□□□□ 0.37
VEGFA-217ENST00000518538 CBX3Q13185 183 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 MSMO1Q15800 293 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 DHRS11Q6UWP2 260 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 STPG2Q8N412 459 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 ABHD1Q96SE0 405 aa17.36■□□□□ 0.37
VEGFA-217ENST00000518538 NXF2Q9GZY0 626 aaKnown RBP17.36■□□□□ 0.37
VEGFA-217ENST00000518538 PSMB11A5LHX3 300 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 LINC00473A8K010 186 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 HLA-DMAP28067 261 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 HRH1P35367 487 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 ZNF660Q6AZW8 331 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-217ENST00000518538 LIN54Q6MZP7 749 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 BVESQ8NE79 360 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 MCFD2Q8NI22 146 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 SECTM1Q8WVN6 248 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 DIRAS2Q96HU8 199 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 HSD17B10Q99714 261 aaKnown RBP17.35■□□□□ 0.37
VEGFA-217ENST00000518538 FBXL15Q9H469 300 aa17.35■□□□□ 0.37
VEGFA-217ENST00000518538 FXYD4P59646 89 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 HERV-K104P61576 105 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 EIF4EBP1Q13541 118 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-217ENST00000518538 PLGLAQ15195 96 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 PSG5Q15238 335 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 C2orf68Q2NKX9 166 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 RNASE12Q5GAN4 147 aaKnown RBP17.34■□□□□ 0.37
VEGFA-217ENST00000518538 HIST2H2BDQ6DRA6 164 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 C10orf99Q6UWK7 81 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 KCTD9Q7L273 389 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 NDUFA11Q86Y39 141 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 OR4X2Q8NGF9 303 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 OR52I2Q8NH67 350 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 SLC5A7Q9GZV3 580 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 RABL2AQ9UBK7 228 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-217ENST00000518538 METTL1Q9UBP6 276 aaKnown RBP17.34■□□□□ 0.37
VEGFA-217ENST00000518538 LINC00527Q9UJ94 153 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 RABL2BQ9UNT1 228 aa17.34■□□□□ 0.37
VEGFA-217ENST00000518538 IGHV7-81A0A0B4J1V7 117 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 LGALS7P47929 136 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 MRPS10P82664 201 aaKnown RBP17.33■□□□□ 0.36
VEGFA-217ENST00000518538 CD83Q01151 205 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 TMEM177Q53S58 311 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 ZBTB34Q8NCN2 500 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 FCAMRQ8WWV6 532 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 HARBI1Q96MB7 349 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 CITED2Q99967 270 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF2Q9BSG1 426 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-217ENST00000518538 DCUN1D5Q9BTE7 237 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 CCL28Q9NRJ3 127 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 KLK11Q9UBX7 282 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 MTFP1Q9UDX5 166 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF580Q9UK33 172 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 PRELID3BQ9Y3B1 194 aa17.33■□□□□ 0.36
VEGFA-217ENST00000518538 TET2Q6N021 2002 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-217ENST00000518538 IGF1P05019 195 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 RPL30P62888 115 aaKnown RBP17.32■□□□□ 0.36
VEGFA-217ENST00000518538 SLC35B1P78383 322 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 ACTBL2Q562R1 376 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 TCTEX1D4Q5JR98 221 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 PYHIN1Q6K0P9 492 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF66Q6ZN08 573 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF329Q86UD4 541 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 TMEM17Q86X19 198 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 OR6F1Q8NGZ6 308 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 MOB3AQ96BX8 217 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 GON7Q9BXV9 100 aa17.32■□□□□ 0.36
VEGFA-217ENST00000518538 OR51J1Q9H342 316 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms