RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 LRRC34Q8IZ02 419 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 DAND5Q8N907 189 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 SPACA4Q8TDM5 124 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 SLC35G5Q96KT7 338 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 ATP6V1G3Q96LB4 118 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 KDM5BQ9UGL1 1544 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 DENND4BO75064 1496 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 COL4A1P02462 1669 aa1.48□□□□□ -2.17
RNU6-1028P-201ENST00000517164 A0A1W2PQD3 144 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 M0QX08 132 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 GPX1P07203 203 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 RPL14P50914 215 aaKnown RBP1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 RAP1GDS1P52306 607 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 TAS2R30P59541 319 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 HSP90B2PQ58FF3 399 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 LHFPL1Q86WI0 220 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 BAP18Q8IXM2 172 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 PACRGLQ8N7B6 248 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 OR7G1Q8NGA0 311 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 SLC37A2Q8TED4 501 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 WDR54Q9H977 334 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 EMC3Q9P0I2 261 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 RIMS2Q9UQ26 1411 aa1.47□□□□□ -2.17
RNU6-1028P-201ENST00000517164 THSD7AQ9UPZ6 1657 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 RFPL4AA6NLU0 287 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 RFPL4AL1F8VTS6 287 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 STX10O60499 249 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 NEMFO60524 1076 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CD24P25063 80 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SNAP25P60880 206 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ERHP84090 104 aaKnown RBP1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 GNA13Q14344 377 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SDHAF4Q5VUM1 108 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CLEC6AQ6EIG7 209 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 FUNDC1Q8IVP5 155 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 OR5J2Q8NH18 312 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CLDND2Q8NHS1 167 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 RNASE6Q93091 150 aaKnown RBP1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CPNE2Q96FN4 548 aaPredicted RBP1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 NSRP1Q9H0G5 558 aaKnown RBP1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 MS4A6AQ9H2W1 248 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SDK1Q7Z5N4 2213 aa1.46□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TMSB15BA0A087X1C1 80 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TRGV5A0A0B4J1U4 118 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TRAV41A0A0B4J266 112 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 FABP12A6NFH5 140 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 GOLGA6L10A6NI86 522 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ATP8B1O43520 1251 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 NDUFB2O95178 105 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 BPGMP07738 259 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 PSMB6P28072 239 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 RBM11P57052 281 aaKnown RBP1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TMEM33P57088 247 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 BTN3A2P78410 334 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 FABP5Q01469 135 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 LGALS9BQ3B8N2 356 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 PABPC1L2AQ5JQF8 200 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 N4BP2L1Q5TBK1 243 aaPredicted RBP1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 Q6ZSA8 131 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ZNF563Q8TA94 476 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 LHFPL5Q8TAF8 219 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SMCR5Q8TEV8 140 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SFRP2Q96HF1 295 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CFAP53Q96M91 514 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TIPINQ9BVW5 301 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SLC22A4Q9H015 551 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 PCYT1BQ9Y5K3 369 aaPredicted RBP1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 MED13Q9UHV7 2174 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 A0A1W2PP64 1363 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 NUMA1Q14980 2115 aa1.45□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ZNF532Q9HCE3 1301 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 WDR90Q96KV7 1748 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TINCRA0A1B0GVN0 87 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 LINC00854A0A1B0GVQ3 168 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CALUO43852 315 aaPredicted RBP1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 DNM1P34Q6PK57 102 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SLC35E3Q7Z769 313 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 LRRC28Q86X40 367 aaPredicted RBP1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 CD302Q8IX05 232 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 MS4A6EQ96DS6 147 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 C7orf50Q9BRJ6 194 aaKnown RBP1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 DCUN1D5Q9BTE7 237 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 HHLA3Q9XRX5 114 aa1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 RP1L1Q8IWN7 2480 aaPredicted RBP1.44□□□□□ -2.18
RNU6-1028P-201ENST00000517164 DICER1Q9UPY3 1922 aaKnown RBP1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TMED7-TICAM2A0A0A6YYA0 188 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 OR6C6A6NF89 314 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ZNF705FA8MVS1 300 aaPredicted RBP1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 BHLHE40O14503 412 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 MT-CO2P00403 227 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 GABRA2P47869 451 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 UBE2G2P60604 165 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 GNA12Q03113 381 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 SLC38A11Q08AI6 406 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ZNF791Q3KP31 576 aaPredicted RBP1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 COA5Q86WW8 74 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ASB13Q8WXK3 278 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 ZNF514Q96K75 400 aaPredicted RBP1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TMEM109Q9BVC6 243 aa1.43□□□□□ -2.18
RNU6-1028P-201ENST00000517164 TTTY13Q9BZ97 58 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms