RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 FOXI3A8MTJ6 420 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 LINC00299Q6ZSB3 139 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 RAB33BQ9H082 229 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 POLR2AP24928 1970 aaKnown RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 CTXND1A0A1B0GTU2 59 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 AMY1AP04745 511 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 EFNB2P52799 333 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 LINC01587Q99440 93 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 TRAV30A0A087WSZ9 112 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 COMPP49747 757 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 BSPH1Q075Z2 132 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 OR9G1Q8NH87 305 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 FOXC2Q99958 501 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 ZNF430Q9H8G1 570 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 A0A1W2PQM1 296 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 COX6CP09669 75 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 TRPM3Q9HCF6 1732 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 NUP214P35658 2090 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 OR4C45A6NMZ5 311 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
TRIM41-209ENST00000515834 ZP3P21754 424 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 MIA3Q5JRA6 1907 aa9.47□□□□□ -0.89
TRIM41-209ENST00000515834 A0A1W2PPC1 479 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 AWAT1Q58HT5 328 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 MBNL2Q5VZF2 373 aaKnown RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 XAF1Q6GPH4 301 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 TRGV2A0A075B6R0 118 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 HINT1P49773 126 aaPredicted RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 ZNF343Q6P1L6 599 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 PPP1R32Q7Z5V6 425 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 TP53RKQ96S44 253 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 QTRT1Q9BXR0 403 aaKnown RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 METRNQ9UJH8 293 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 MYO5AQ9Y4I1 1855 aaKnown RBP9.46□□□□□ -0.89
TRIM41-209ENST00000515834 DNLZQ5SXM8 178 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 NCMAPQ5T1S8 102 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 DNM1P46Q6ZS02 220 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 DSPPQ9NZW4 1301 aa9.46□□□□□ -0.89
TRIM41-209ENST00000515834 A6NDN8 102 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 TSPAN2O60636 221 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 IGKV1D-33P01593 117 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 IGKV1-33P01594 117 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 IGHV3-11P01762 117 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 LTBRP36941 435 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 VN1R17PQ8TDU5 208 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 SCMH1Q96GD3 660 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 PLXNB2O15031 1838 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 CA2P00918 260 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 GLIPR1P48060 266 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 HMGA2P52926 109 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 MIC13Q5XKP0 118 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 RHOVQ96L33 236 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 DMRTA2Q96SC8 542 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 KLK13Q9UKR3 277 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 KIAA1217Q5T5P2 1943 aa9.46□□□□□ -0.9
TRIM41-209ENST00000515834 CRHP06850 196 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 ZP4Q12836 540 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 SIGLEC12Q96PQ1 595 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 CHRNA10Q9GZZ6 450 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 A8MWL6 223 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 AQP10Q96PS8 301 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 BEX4Q9NWD9 120 aaPredicted RBP9.45□□□□□ -0.9
TRIM41-209ENST00000515834 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 RUNX1Q01196 453 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
TRIM41-209ENST00000515834 JMJD8Q96S16 334 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 RBFOX2O43251 390 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM41-209ENST00000515834 IL4P05112 153 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 MAP1LC3AQ9H492 121 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 A0A0U1RQV5 110 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 PTP4A3O75365 173 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 ZNF25P17030 456 aaPredicted RBP9.45□□□□□ -0.9
TRIM41-209ENST00000515834 SLIRPQ9GZT3 109 aaKnown RBP9.45□□□□□ -0.9
TRIM41-209ENST00000515834 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
TRIM41-209ENST00000515834 TIAF1O95411 115 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 MOSP00540 346 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 FAM201AQ5SY85 155 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
TRIM41-209ENST00000515834 HOGA1Q86XE5 327 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 A0A1W2PP11 408 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 TCRBV4S1A1TA0A5B7 111 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 TDGF1P13385 188 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 UNC119Q13432 240 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 STHQ8IWL8 128 aa9.44□□□□□ -0.9
TRIM41-209ENST00000515834 SCN2AQ99250 2005 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms