RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 CASTOR1Q8WTX7 329 aa10.2□□□□□ -0.78
CDK7-213ENST00000515391 RCC1LQ96I51 464 aaKnown RBP10.2□□□□□ -0.78
CDK7-213ENST00000515391 GINS4Q9BRT9 223 aa10.2□□□□□ -0.78
CDK7-213ENST00000515391 FAM103A1Q9BTL3 118 aaKnown RBP10.2□□□□□ -0.78
CDK7-213ENST00000515391 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.2□□□□□ -0.781e-7■□□□□ 9.7
CDK7-213ENST00000515391 METTL1Q9UBP6 276 aaKnown RBP10.2□□□□□ -0.78
CDK7-213ENST00000515391 RBM7Q9Y580 266 aaKnown RBP10.2□□□□□ -0.78
CDK7-213ENST00000515391 A3GALT2U3KPV4 340 aa10.2□□□□□ -0.78
CDK7-213ENST00000515391 A6NJY4 79 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 CCL24O00175 119 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 SOX15O60248 233 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
CDK7-213ENST00000515391 KRTAP10-11P60412 298 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 LSM3P62310 102 aaKnown RBP10.19□□□□□ -0.78
CDK7-213ENST00000515391 KIAA0141Q14154 515 aaPredicted RBP10.19□□□□□ -0.78
CDK7-213ENST00000515391 ZNF260Q3ZCT1 412 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 HACD4Q5VWC8 232 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 H1FOOQ8IZA3 346 aaPredicted RBP10.19□□□□□ -0.78
CDK7-213ENST00000515391 BVESQ8NE79 360 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 MRAPQ8TCY5 172 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 ABHD5Q8WTS1 349 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 SLC25A38Q96DW6 304 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 OR5B12Q96R08 314 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 GNB4Q9HAV0 340 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 SLC35D1Q9NTN3 355 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 RHBDL2Q9NX52 303 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 ZNF580Q9UK33 172 aa10.19□□□□□ -0.78
CDK7-213ENST00000515391 TRAV18A0A075B6X5 111 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 A0A1W2PN81 502 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 RBBP9O75884 186 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 CA2P00918 260 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 APOA2P02652 100 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 FCER2P06734 321 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 OR5H8P0DN80 308 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 PTHLHP12272 177 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 DTYMKP23919 212 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 CHRNA7P36544 502 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 GNG2P59768 71 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 ARL6IP1Q15041 203 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 ZNF660Q6AZW8 331 aaPredicted RBP10.18□□□□□ -0.78
CDK7-213ENST00000515391 Q6ZS49 121 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
CDK7-213ENST00000515391 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
CDK7-213ENST00000515391 YIPF6Q96EC8 236 aa10.18□□□□□ -0.78
CDK7-213ENST00000515391 SLC25A17O43808 307 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 AIREO43918 545 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 NFYAP23511 347 aaPredicted RBP10.17□□□□□ -0.78
CDK7-213ENST00000515391 SLC6A1P30531 599 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 RAB9AP51151 201 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 SRSF7Q16629 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDK7-213ENST00000515391 C19orf54Q5BKX5 351 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 TMEM65Q6PI78 240 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 REC114Q7Z4M0 266 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 PPP1R27Q86WC6 154 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 PDPNQ86YL7 162 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 MINDY2Q8NBR6 621 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 OR13F1Q8NGS4 319 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 TSNAXQ99598 290 aaKnown RBP10.17□□□□□ -0.78
CDK7-213ENST00000515391 RNF5Q99942 180 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 NUBP2Q9Y5Y2 271 aa10.17□□□□□ -0.78
CDK7-213ENST00000515391 WI2-2373I1.2A0A1W2PRP0 233 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 SRRM4A7MD48 611 aaKnown RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 K7EIL1 84 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 ARPC1BO15143 372 aaKnown RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 DUS4LO95620 317 aaKnown RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 DIRAS3O95661 229 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 RPS19P39019 145 aaKnown RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 GNB1P62873 340 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 PJVKQ0ZLH3 352 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 UNQ5815/PRO19632Q6UWF5 114 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 GVQW1Q8N7I0 195 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 LFNGQ8NES3 379 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 OR11H1Q8NG94 326 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 ALX4Q9H161 411 aaPredicted RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 DCSTAMPQ9H295 470 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 FOXA2Q9Y261 457 aaPredicted RBP10.16□□□□□ -0.78
CDK7-213ENST00000515391 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
CDK7-213ENST00000515391 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 LINC00473A8K010 186 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 TMEM127O75204 238 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 SCGNO76038 276 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 CRYGBP07316 175 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 DUTP33316 252 aaKnown RBP10.15□□□□□ -0.78
CDK7-213ENST00000515391 ALDH3B2P48448 385 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 LUMP51884 338 aaPredicted RBP10.15□□□□□ -0.78
CDK7-213ENST00000515391 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.78
CDK7-213ENST00000515391 SSBP2P81877 361 aaPredicted RBP10.15□□□□□ -0.78
CDK7-213ENST00000515391 PITPNAQ00169 270 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 FXYD3Q14802 87 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 ASPHD1Q5U4P2 390 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 CNIH2Q6PI25 160 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 ZNF562Q6V9R5 426 aa10.15□□□□□ -0.78
CDK7-213ENST00000515391 GPR141Q7Z602 305 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms