RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 PTP4A3O75365 173 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 TMEM241Q24JQ0 296 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 ELF5Q9UKW6 265 aaPredicted RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 SGK494Q96LW2 274 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 INHBBP09529 407 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 RPL8P62917 257 aaKnown RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 FXYD3Q14802 87 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 WDYHV1Q96HA8 205 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 TGFBR3LH3BV60 316 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 MFNGO00587 321 aa12.32□□□□□ -0.44
TRIO-222ENST00000515144 SRSF10O75494 262 aaKnown RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
TRIO-222ENST00000515144 TMEM262E9PQX1 116 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 ZNF837Q96EG3 531 aaPredicted RBP12.31□□□□□ -0.44
TRIO-222ENST00000515144 Q9N2K0 584 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 FAM106AQ4KMX7 169 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 GSX2Q9BZM3 304 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 MEGF10Q96KG7 1140 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 PCDH15Q96QU1 1955 aa12.31□□□□□ -0.44
TRIO-222ENST00000515144 CST4P01036 141 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 PRSS1P07477 247 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 ZNF66Q6ZN08 573 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 TMEM116Q8NCL8 245 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 TCEAL7Q9BRU2 100 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 USF1P22415 310 aaPredicted RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 FOXF2Q12947 444 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 UBE2V2Q15819 145 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 TMEM255AQ5JRV8 349 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 RGP1Q92546 391 aaPredicted RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 FREM1Q5H8C1 2179 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 MED13Q9UHV7 2174 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 WISP3O95389 354 aaPredicted RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 CFHR1Q03591 330 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 ZNF273Q14593 569 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 PINLYPA6NC86 204 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 NDUFA2O43678 99 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 ISG15P05161 165 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 LRRC75AQ8NAA5 344 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 GALP22466 123 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 MC5RP33032 325 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 ZNF106Q9H2Y7 1883 aaKnown RBP12.3□□□□□ -0.44
TRIO-222ENST00000515144 HPRT1P00492 218 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 TMEM97Q5BJF2 176 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 U3KQ87 197 aa12.3□□□□□ -0.44
TRIO-222ENST00000515144 ATP6V1FQ16864 119 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 TMEM78Q5T7P6 136 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 OR52M1Q8NGK5 317 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 HELTA6NFD8 242 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 AMY1AP04745 511 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 DEFA6Q01524 100 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 RNF151Q2KHN1 245 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 MMP16P51512 607 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 RBKSQ9H477 322 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 A0A1W2PS18 150 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 RGS13O14921 159 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 PAGE4O60829 102 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 SRD5A1P18405 259 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 LPAR5Q9H1C0 372 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 IGHV3-11P01762 117 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
TRIO-222ENST00000515144 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
TRIO-222ENST00000515144 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 COLCA1Q6ZS62 124 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
TRIO-222ENST00000515144 GLRXP35754 106 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 MRPL54Q6P161 138 aaKnown RBP12.28□□□□□ -0.44
TRIO-222ENST00000515144 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 HYPMO75409 117 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 LIMS1P48059 325 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 LRP11Q86VZ4 500 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 S100A8P05109 93 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 SPCS3P61009 180 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 Q6ZNX1 250 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 OR4C13Q8NGP0 309 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 CXCL3P19876 107 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 TMEM56-RWDD3S4R434 201 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 TCTE3Q8IZS6 198 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms