RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, human

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIL1-215	ENST00000515008	NUBP2	Q9Y5Y2	271 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	SEC14L6	B5MCN3	397 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	GSTT2	P0CG29	244 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	GSTT2B	P0CG30	244 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	DTYMK	P23919	212 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	TALDO1	P37837	337 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	LUM	P51884	338 aa	Predicted RBP	13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	RPS16	P62249	146 aa	Known RBP	13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	TAGLN	Q01995	201 aa	Known RBP	13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	ARFRP1	Q13795	201 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	AKIRIN2	Q53H80	203 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	IGSF11	Q5DX21	431 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	TPRA1	Q86W33	373 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	PPP1R27	Q86WC6	154 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	NR2C2AP	Q86WQ0	139 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	OR1N2	Q8NGR9	330 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	FLYWCH2	Q96CP2	140 aa	Known RBP	13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	SLC35D1	Q9NTN3	355 aa		13.73	□□□□□ -0.21
SIL1-215	ENST00000515008	TXNL4B	Q9NX01	149 aa	Known RBP	13.73	□□□□□ -0.21
SIL1-215	ENST00000515008		A0A075B6Q4	140 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008		A0A0B4J203	849 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	FCN1	O00602	326 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	SOX15	O60248	233 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	SCGN	O76038	276 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	OR8U9	P0C7N5	309 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	EGR2	P11161	476 aa	Predicted RBP	13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	INSL3	P51460	131 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	GNB1	P62873	340 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	CBX3	Q13185	183 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	B9D2	Q9BPU9	175 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	GINS4	Q9BRT9	223 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	ATG5	Q9H1Y0	275 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	SSR3	Q9UNL2	185 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	A3GALT2	U3KPV4	340 aa		13.72	□□□□□ -0.21
SIL1-215	ENST00000515008	CA2	P00918	260 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	LGALS1	P09382	135 aa	Known RBP	13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	CD40LG	P29965	261 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	LGALS7	P47929	136 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	ACTBL2	Q562R1	376 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	ASPHD1	Q5U4P2	390 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	ZNF773	Q6PK81	442 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	UNQ5815/PRO19632	Q6UWF5	114 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	ARPC1A	Q92747	370 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	SLA2	Q9H6Q3	261 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	SDHAF2	Q9NX18	166 aa		13.71	□□□□□ -0.21
SIL1-215	ENST00000515008	SLC25A17	O43808	307 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	RRAS	P10301	218 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	CD69	Q07108	199 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	RTL8B	Q17RB0	113 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	MAFIP	Q8WZ33	124 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	ADTRP	Q96IZ2	230 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	OR5B12	Q96R08	314 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	CLCC1	Q96S66	551 aa		13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	RBM7	Q9Y580	266 aa	Known RBP	13.7	□□□□□ -0.22
SIL1-215	ENST00000515008	LINC01619	G3V211	115 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008		H3BUA1	57 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	LINC00205	P59089	165 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	PITPNA	Q00169	270 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	FXYD3	Q14802	87 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	ZNF260	Q3ZCT1	412 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	HACD4	Q5VWC8	232 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	LFNG	Q8NES3	379 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	HARBI1	Q96MB7	349 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	FAM103A1	Q9BTL3	118 aa	Known RBP	13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	DCSTAMP	Q9H295	470 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	TPSG1	Q9NRR2	321 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	SCOC	Q9UIL1	159 aa		13.69	□□□□□ -0.22
SIL1-215	ENST00000515008	SORL1	Q92673	2214 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	SMIM30	A4D0T7	59 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	OVOL1	O14753	267 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	ARPC1B	O15143	372 aa	Known RBP	13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	IGLV2-23	P01705	113 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	CTXN2	P0C2S0	81 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	ECI1	P42126	302 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	SCAND1	P57086	179 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	CDNF	Q49AH0	187 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	TMEM177	Q53S58	311 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	VAX1	Q5SQQ9	334 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	SFXN4	Q6P4A7	337 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	ZNF429	Q86V71	674 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	GRPEL2	Q8TAA5	225 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	C5orf30	Q96GV9	206 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	TMEM68	Q96MH6	324 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	DAPK2	Q9UIK4	370 aa		13.68	□□□□□ -0.22
SIL1-215	ENST00000515008	SHOX	O15266	292 aa		13.67	□□□□□ -0.22
SIL1-215	ENST00000515008	CRYGB	P07316	175 aa		13.67	□□□□□ -0.22
SIL1-215	ENST00000515008	TPPP2	P59282	170 aa		13.67	□□□□□ -0.22
SIL1-215	ENST00000515008	DCUN1D4	Q92564	292 aa		13.67	□□□□□ -0.22
SIL1-215	ENST00000515008	RRP15	Q9Y3B9	282 aa	Known RBP	13.67	□□□□□ -0.22
SIL1-215	ENST00000515008	IGKV1D-8	A0A087WSZ0	117 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	CNIH1	O95406	144 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	DUT	P33316	252 aa	Known RBP	13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	POC5	Q8NA72	575 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	BVES	Q8NE79	360 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	LGALS14	Q8TCE9	139 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	CASTOR1	Q8WTX7	329 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	DDB2	Q92466	427 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	RHOV	Q96L33	236 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms