RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 LUMP51884 338 aaPredicted RBP5.68□□□□□ -1.5
HTT-212ENST00000513639 CLDN12P56749 244 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 DEFB136Q30KP8 78 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 ZNF260Q3ZCT1 412 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 PLAC9Q5JTB6 97 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 HES5Q5TA89 166 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 IZUMO2Q6UXV1 221 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 PDPNQ86YL7 162 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 OR10R2Q8NGX6 335 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 ABHD5Q8WTS1 349 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 CNBD2Q96M20 576 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 HDHD3Q9BSH5 251 aaPredicted RBP5.68□□□□□ -1.5
HTT-212ENST00000513639 FBXL15Q9H469 300 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 Q9H521 79 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 RDH8Q9NYR8 311 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 METTL1Q9UBP6 276 aaKnown RBP5.68□□□□□ -1.5
HTT-212ENST00000513639 SCOCQ9UIL1 159 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 RBM7Q9Y580 266 aaKnown RBP5.68□□□□□ -1.5
HTT-212ENST00000513639 TRBV6-7A0A0A0MS04 114 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 A0A1W2PN81 502 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 LINC01619G3V211 115 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 M0R1X1 148 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 OVOL1O14753 267 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 BET1O15155 118 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 SCGNO76038 276 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 SLC22A5O76082 557 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 HSPB1P04792 205 aaKnown RBP5.67□□□□□ -1.5
HTT-212ENST00000513639 OR8U9P0C7N5 309 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 CHRNA7P36544 502 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 PITPNAQ00169 270 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 ARFRP1Q13795 201 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 FXYD3Q14802 87 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 SSX1Q16384 188 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 RTL8BQ17RB0 113 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 ECSCRQ19T08 205 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 UNQ5815/PRO19632Q6UWF5 114 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
HTT-212ENST00000513639 Q6ZS49 121 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 TPRA1Q86W33 373 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 DRAXINQ8NBI3 349 aaPredicted RBP5.67□□□□□ -1.5
HTT-212ENST00000513639 LFNGQ8NES3 379 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 ADTRPQ96IZ2 230 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 CLCC1Q96S66 551 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 GINS4Q9BRT9 223 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 ELOVL1Q9BW60 279 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 KCNK15Q9H427 330 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 NDUFB11Q9NX14 153 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 OR1A1Q9P1Q5 309 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
HTT-212ENST00000513639 LSM4Q9Y4Z0 139 aaKnown RBP5.67□□□□□ -1.5
HTT-212ENST00000513639 A3GALT2U3KPV4 340 aa5.67□□□□□ -1.5
HTT-212ENST00000513639 IGKV1-6A0A0C4DH72 117 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 C13orf42A0A1B0GVH6 325 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 NOTOA8MTQ0 251 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 H3BUA1 57 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 RAB27BO00194 218 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 PROP1O75360 226 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 BRI3O95415 125 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 GHRHP01286 108 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 IGKV1-16P04430 117 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 FCGR3AP08637 254 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 LGALS1P09382 135 aaKnown RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 GSTT2P0CG29 244 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 GSTT2BP0CG30 244 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 HIST1H1DP16402 221 aaKnown RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 GNB3P16520 340 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 DTYMKP23919 212 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 FGF9P31371 208 aaPredicted RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 GABARAPL2P60520 117 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 TATDN3Q17R31 274 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 MOGAT2Q3SYC2 334 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 CDNFQ49AH0 187 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 IGSF11Q5DX21 431 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 ZNF383Q8NA42 475 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 DCUN1D4Q92564 292 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 FCGR1BQ92637 280 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 ARPC1AQ92747 370 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 RBMXL1Q96E39 390 aaKnown RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 CYYR1Q96J86 154 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 RHOVQ96L33 236 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 OR5B12Q96R08 314 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 OR4C12Q96R67 309 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 PARP12Q9H0J9 701 aaKnown RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 ATG5Q9H1Y0 275 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 DCSTAMPQ9H295 470 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 GNB4Q9HAV0 340 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 RANGRFQ9HD47 186 aaPredicted RBP5.66□□□□□ -1.5
HTT-212ENST00000513639 ZNF355PQ9NSJ1 428 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 SLC35D1Q9NTN3 355 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 SSR3Q9UNL2 185 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 KCNK7Q9Y2U2 307 aa5.66□□□□□ -1.5
HTT-212ENST00000513639 A0A075B6Q4 140 aa5.65□□□□□ -1.5
HTT-212ENST00000513639 SHOXO15266 292 aa5.65□□□□□ -1.5
HTT-212ENST00000513639 SLC25A17O43808 307 aa5.65□□□□□ -1.5
HTT-212ENST00000513639 SOX15O60248 233 aa5.65□□□□□ -1.5
HTT-212ENST00000513639 SAP30O75446 220 aa5.65□□□□□ -1.5
HTT-212ENST00000513639 LY86O95711 162 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms