RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 GNG2P59768 71 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 RPS16P62249 146 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 GNB1P62873 340 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 CBX3Q13185 183 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 FOXE3Q13461 319 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 SRSF7Q16629 238 aaKnown RBP eCLIP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 C5orf64Q2M2E5 130 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 ZNF260Q3ZCT1 412 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 CDNFQ49AH0 187 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 LY6G6FQ5SQ64 297 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 IDNKQ5T6J7 187 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 MRPL41Q8IXM3 137 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 OR8U1Q8NH10 309 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 MRAPQ8TCY5 172 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 DPF1Q92782 380 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 DGCR14Q96DF8 476 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 RCC1LQ96I51 464 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 OR5B12Q96R08 314 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 SOSTQ9BQB4 213 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 ST6GALNAC5Q9BVH7 336 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 TOLLIPQ9H0E2 274 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 MIXL1Q9H2W2 232 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 OR51J1Q9H342 316 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 GHITMQ9H3K2 345 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 FBXL15Q9H469 300 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 NECAP2Q9NVZ3 263 aa5.11□□□□□ -1.59
KDM3B-208ENST00000512928 METTL1Q9UBP6 276 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 RSL24D1Q9UHA3 163 aaKnown RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 ELF5Q9UKW6 265 aaPredicted RBP5.11□□□□□ -1.59
KDM3B-208ENST00000512928 hCG_2014768A0A024R1R8 64 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 IGHV7-81A0A0B4J1V7 117 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 A0A1W2PN81 502 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 TMEM235A6NFC5 223 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 CCL24O00175 119 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 RRHO14718 337 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 CNIH1O95406 144 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 HLA-DRB1P01911 266 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 APOA1P02647 267 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 ELANEP08246 267 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 ZNF182P17025 639 aaPredicted RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 CHRNA7P36544 502 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 THBS3P49746 956 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 RORCP51449 518 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 ARL6IP1Q15041 203 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 C4orf46Q504U0 113 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 UBE2NLQ5JXB2 153 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 KPRPQ5T749 579 aaPredicted RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 REC114Q7Z4M0 266 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 LINC00482Q8N8I6 264 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 NPBQ8NG41 125 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 GRPEL2Q8TAA5 225 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 CASTOR1Q8WTX7 329 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 NUDCD2Q8WVJ2 157 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 FLYWCH2Q96CP2 140 aaKnown RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 RAX2Q96IS3 184 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 TSNAXQ99598 290 aaKnown RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 AGMATQ9BSE5 352 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 FAM103A1Q9BTL3 118 aaKnown RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 SLC35D1Q9NTN3 355 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
KDM3B-208ENST00000512928 ADAM30Q9UKF2 790 aa5.1□□□□□ -1.59
KDM3B-208ENST00000512928 TRAV18A0A075B6X5 111 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 IGKV1D-8A0A087WSZ0 117 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 TRBV6-7A0A0A0MS04 114 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 FCN1O00602 326 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 ITGB1BP1O14713 200 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 SHOXO15266 292 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 XRCC3O43542 346 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 SLC25A17O43808 307 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 SSX5O60225 188 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 RBBP9O75884 186 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 TUSC2O75896 110 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 NDUFA3O95167 84 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 DUS4LO95620 317 aaKnown RBP5.09□□□□□ -1.59
KDM3B-208ENST00000512928 CA2P00918 260 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 IGHG4P01861 327 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 HLA-DQB1P01920 261 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 IGKV1-16P04430 117 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 IGF1P05019 195 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 EIF4EP06730 217 aaKnown RBP5.09□□□□□ -1.59
KDM3B-208ENST00000512928 FCER2P06734 321 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 NAT1P18440 290 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 DTYMKP23919 212 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PSMB8P28062 276 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 CD40LGP29965 261 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 SLC6A1P30531 599 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 MYCNOSP40205 109 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 ETV6P41212 452 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 ARPC4P59998 168 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 CX3CL1P78423 397 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PRR20EP86478 221 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PRR20CP86479 221 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PRR20DP86480 221 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PRR20BP86481 221 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PRR20AP86496 221 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PITPNAQ00169 270 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 CFHR3Q02985 330 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 PSG5Q15238 335 aa5.09□□□□□ -1.59
KDM3B-208ENST00000512928 RTL8BQ17RB0 113 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms