RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	UBQLN2	Q9UHD9	624 aa		4.09	□□□□□ -1.75
MATR3-218	ENST00000511978	BLOC1S6	Q9UL45	172 aa		4.09	□□□□□ -1.75
MATR3-218	ENST00000511978	KPTN	Q9Y664	436 aa		4.09	□□□□□ -1.75
MATR3-218	ENST00000511978	ARHGAP32	A7KAX9	2087 aa		4.09	□□□□□ -1.76
MATR3-218	ENST00000511978	TRAV8-7	A0A075B6U6	113 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978		A0A087X0K7	114 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	IGHV1-69D	A0A0B4J2H0	117 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	CENPVL3	A0A0U1RRI6	287 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978		K7N7A8	449 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978		M0R1W7	72 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	SIRPB1	O00241	398 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	SLC33A1	O00400	549 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	CUBN	O60494	3623 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	VENTX	O95231	258 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	OR2H2	O95918	312 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	IGHV1-69	P01742	117 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	MAS1	P04201	325 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	ALDOB	P05062	364 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	HSMCR30	P0CW71	290 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	CCL3L1	P16619	93 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	IGFBP3	P17936	291 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GABRR1	P24046	479 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	ZNF93	P35789	620 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	OR3A4P	P47883	348 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	DLX1	P56177	255 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	EDDM3B	P56851	147 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GABARAPL2	P60520	117 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	RPL31	P62899	125 aa	Known RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	PRB3	Q04118	309 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	KLRD1	Q13241	179 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	EDDM3A	Q14507	147 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	RSU1	Q15404	277 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	SPHAR	Q15513	63 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GRK1	Q15835	563 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	RBM48	Q5RL73	367 aa	Known RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	NCR3LG1	Q68D85	454 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	ELP2	Q6IA86	826 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GDPD3	Q7L5L3	318 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	TCF23	Q7RTU1	214 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	PRSS48	Q7RTY5	328 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	SIGLECL1	Q8N7X8	197 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	CHST4	Q8NCG5	386 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	PXT1	Q8NFP0	134 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	OR4S1	Q8NGB4	309 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	OR4M1	Q8NGD0	313 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	TMEM158	Q8WZ71	300 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	THRSP	Q92748	146 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	TMED9	Q9BVK6	235 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	C19orf24	Q9BVV8	132 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	CHST6	Q9GZX3	395 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978		Q9H521	79 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	METTL8	Q9H825	291 aa	Known RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	RHOF	Q9HBH0	211 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	EXOSC4	Q9NPD3	245 aa	Known RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GLS2	Q9UI32	602 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	FOXJ3	Q9UPW0	622 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	GSTK1	Q9Y2Q3	226 aa		4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	SOX21	Q9Y651	276 aa	Predicted RBP	4.08	□□□□□ -1.76
MATR3-218	ENST00000511978	NOTCH3	Q9UM47	2321 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978		A0A0U1RQK1	487 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	ZNF320	A2RRD8	509 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	RNASEK-C17orf49	H0YIS7	233 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978		K7EQG2	157 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	SH2D1B	O14796	132 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	NPFF	O15130	113 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	PIN1P1	O15428	100 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	DENR	O43583	198 aa	Known RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	GPX5	O75715	221 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	CLPX	O76031	633 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	CDRT1	O95170	752 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	ZNF44	P15621	663 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	SERPINA2	P20848	420 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	FCGR2B	P31994	310 aa	Predicted RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	FCGR2C	P31995	323 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	PTGFR	P43088	359 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	MAP2K4	P45985	399 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	NDUFV3	P56181	108 aa	Known RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	RBM11	P57052	281 aa	Known RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	BPIFB3	P59826	476 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	RPS25	P62851	125 aa	Known RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	ACTG1	P63261	375 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	MLLT11	Q13015	90 aa	Predicted RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	BAMBI	Q13145	260 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	INSL4	Q14641	139 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	DEFB112	Q30KQ8	113 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	PIGY	Q3MUY2	71 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	FAM27D1	Q5T7N8	215 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	LIPK	Q5VXJ0	399 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978		Q6P435	159 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	METAP1D	Q6UB28	335 aa	Predicted RBP	4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	PNKD	Q8N490	385 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	JAGN1	Q8N5M9	183 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	MS4A15	Q8N5U1	240 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978		Q8N7P7	452 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	TPRX1	Q8N7U7	411 aa		4.07	□□□□□ -1.76
MATR3-218	ENST00000511978	ZDHHC22	Q8N966	263 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms