RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MAP2K4P45985 399 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 PITPNAQ00169 270 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 FABP5Q01469 135 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 MLLT11Q13015 90 aaPredicted RBP11.88□□□□□ -0.51
TPM3-219ENST00000509409 FXYD3Q14802 87 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 HES5Q5TA89 166 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 PDPNQ86YL7 162 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 OR5T1Q8NG75 326 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 RHOVQ96L33 236 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 MGLLQ99685 303 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 SLC35D1Q9NTN3 355 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 IGKV1-6A0A0C4DH72 117 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 C13orf42A0A1B0GVH6 325 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 SLC25A17O43808 307 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 SPDEFO95238 335 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 OR8U9P0C7N5 309 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 GP9P14770 177 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 PLAC9Q5JTB6 97 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 ACSM6Q6P461 480 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 OVCH2Q7RTZ1 564 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 RAB3CQ96E17 227 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 SLA2Q9H6Q3 261 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 TPSG1Q9NRR2 321 aa11.87□□□□□ -0.51
TPM3-219ENST00000509409 RBM7Q9Y580 266 aaKnown RBP11.87□□□□□ -0.51
TPM3-219ENST00000509409 PDCD5O14737 125 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 ARPC1BO15143 372 aaKnown RBP11.86□□□□□ -0.51
TPM3-219ENST00000509409 FABP7O15540 132 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 SERPINB10P48595 397 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 PLA2G7Q13093 441 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 CBX3Q13185 183 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 PRSS48Q7RTY5 328 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 SBSPONQ8IVN8 264 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.86□□□□□ -0.51
TPM3-219ENST00000509409 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 NRG4Q8WWG1 115 aa11.86□□□□□ -0.51
TPM3-219ENST00000509409 A0A075B6Q4 140 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 C3orf84H3BNL1 204 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 GSTT2P0CG29 244 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 GSTT2BP0CG30 244 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 CRHBPP24387 322 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 GADD45AP24522 165 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 LGALS7P47929 136 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 SRSF7Q16629 238 aaKnown RBP eCLIP11.85□□□□□ -0.513e-11■■■■□ 20.4
TPM3-219ENST00000509409 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
TPM3-219ENST00000509409 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 ANKRD34BA5PLL1 514 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 LDLRAD4O15165 306 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 SHOXO15266 292 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 GNB3P16520 340 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 TALDO1P37837 337 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 ANKRD13BQ86YJ7 626 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 POC5Q8NA72 575 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 BVESQ8NE79 360 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 OR10R2Q8NGX6 335 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 RANGRFQ9HD47 186 aaPredicted RBP11.84□□□□□ -0.51
TPM3-219ENST00000509409 SDHAF2Q9NX18 166 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
TPM3-219ENST00000509409 RYR3Q15413 4870 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 TRIM64CA6NLI5 447 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 FCGR3AP08637 254 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 FRMD6-AS1P0C7T7 363 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 MYL9P24844 172 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 TAGLNQ01995 201 aaKnown RBP11.83□□□□□ -0.52
TPM3-219ENST00000509409 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 ARFRP1Q13795 201 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 RTL8BQ17RB0 113 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 MOGAT2Q3SYC2 334 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 HAPLN4Q86UW8 402 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 RCHY1Q96PM5 261 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 PHB2Q99623 299 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 VCX3BQ9H321 246 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
TPM3-219ENST00000509409 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 SORL1Q92673 2214 aa11.83□□□□□ -0.52
TPM3-219ENST00000509409 TRBV6-7A0A0A0MS04 114 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 METTL21EPA6NDL7 271 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 H3BUA1 57 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 IGLV2-23P01705 113 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 ZP3P21754 424 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 OR10A3P58181 314 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 ZNF367Q7RTV3 350 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 TMEM68Q96MH6 324 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 CABLES2Q9BTV7 478 aa11.82□□□□□ -0.52
TPM3-219ENST00000509409 HUWE1Q7Z6Z7 4374 aaKnown RBP11.81□□□□□ -0.52
TPM3-219ENST00000509409 TRAV1-2A0A0B4J238 106 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 IFITM5A6NNB3 132 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 CRYGBP07316 175 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 RRASP10301 218 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms