RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
RNF4-213ENST00000509388 CATR1Q13166 79 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 HNF4GQ14541 408 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 AADACL3Q5VUY0 350 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 LHFPL1Q86WI0 220 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 TCTEX1D2Q8WW35 142 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 CFHR4Q92496 578 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 RAB18Q9NP72 206 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 SLC2A8Q9NY64 477 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
RNF4-213ENST00000509388 PRELID3BQ9Y3B1 194 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 RNF212BA8MTL3 300 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 VENTXO95231 258 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 MOSP00540 346 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 IGLV2-14P01704 120 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 CRYBA1P05813 215 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 RRASP10301 218 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 HABP2Q14520 560 aaPredicted RBP11.91□□□□□ -0.5
RNF4-213ENST00000509388 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 PHLDA2Q53GA4 152 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 C16orf87Q6PH81 154 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 KCTD9Q7L273 389 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 ZNF383Q8NA42 475 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 POC5Q8NA72 575 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 BVESQ8NE79 360 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 PIFOQ8TCI5 191 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 MARCH1Q8TCQ1 289 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
RNF4-213ENST00000509388 RSRP1Q9BUV0 290 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 CHIAQ9BZP6 476 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
RNF4-213ENST00000509388 A6NDX4 124 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 H0YJW9 148 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 UPK1BO75841 260 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
RNF4-213ENST00000509388 LINC00205P59089 165 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 UBA52P62987 128 aaKnown RBP11.9□□□□□ -0.5
RNF4-213ENST00000509388 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
RNF4-213ENST00000509388 TMEM219Q86XT9 240 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 PDPNQ86YL7 162 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
RNF4-213ENST00000509388 C5orf30Q96GV9 206 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.5
RNF4-213ENST00000509388 SLC25A33Q9BSK2 321 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 C1RLQ9NZP8 487 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
RNF4-213ENST00000509388 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
RNF4-213ENST00000509388 LYRM1O43325 122 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 GPR137BO60478 399 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 FCGR3BO75015 233 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
RNF4-213ENST00000509388 CTSDP07339 412 aaPredicted RBP11.89□□□□□ -0.51
RNF4-213ENST00000509388 PI3P19957 117 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
RNF4-213ENST00000509388 OR2B11Q5JQS5 317 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 C16orf82Q7Z2V1 217 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 OR51H1Q8NH63 302 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 GPHA2Q96T91 129 aa11.89□□□□□ -0.51
RNF4-213ENST00000509388 SLC25A21Q9BQT8 299 aaPredicted RBP11.89□□□□□ -0.51
RNF4-213ENST00000509388 LINC00473A8K010 186 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 OR2F2O95006 317 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 RLN1P04808 185 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 KIR2DS2P43631 304 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 PIGPP57054 158 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 DEFA1P59665 94 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 DEFA3P59666 94 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
RNF4-213ENST00000509388 EBI3Q14213 229 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 DHRS7BQ6IAN0 325 aaPredicted RBP11.88□□□□□ -0.51
RNF4-213ENST00000509388 CCBE1Q6UXH8 406 aaPredicted RBP11.88□□□□□ -0.51
RNF4-213ENST00000509388 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 OR8H1Q8NGG4 311 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 RBM14Q96PK6 669 aaKnown RBP11.88□□□□□ -0.51
RNF4-213ENST00000509388 RNF5Q99942 180 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
RNF4-213ENST00000509388 FAM181BA6NEQ2 426 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 M0QZK8 103 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 SHOXO15266 292 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 PLA2G10O15496 165 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 PEX14O75381 377 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 CCR6P51684 374 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 EIF4EBP1Q13541 118 aaPredicted RBP11.87□□□□□ -0.51
RNF4-213ENST00000509388 RBMS2Q15434 407 aaKnown RBP11.87□□□□□ -0.51
RNF4-213ENST00000509388 MMDQ15546 238 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 C11orf88Q6PI97 169 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
RNF4-213ENST00000509388 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms