RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MXD1Q05195 221 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 HACD4Q5VWC8 232 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 ZNF383Q8NA42 475 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 RAX2Q96IS3 184 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 UBE2E2Q96LR5 201 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 GAB2Q9UQC2 676 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 VSIG4Q9Y279 399 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 SNRPBP14678 240 aaKnown RBP14.58□□□□□ -0.08
UBE3D-207ENST00000509102 PPIFP30405 207 aaKnown RBP14.58□□□□□ -0.08
UBE3D-207ENST00000509102 CX3CL1P78423 397 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 RTL8BQ17RB0 113 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 DEFB136Q30KP8 78 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 PYHIN1Q6K0P9 492 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 LGALS14Q8TCE9 139 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 DUX3Q96PT4 197 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 ST6GALNAC5Q9BVH7 336 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 DCSTAMPQ9H295 470 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 FOXA2Q9Y261 457 aaPredicted RBP14.58□□□□□ -0.08
UBE3D-207ENST00000509102 ETV7Q9Y603 341 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 A3GALT2U3KPV4 340 aa14.58□□□□□ -0.08
UBE3D-207ENST00000509102 PRKDCP78527 4128 aaKnown RBP14.58□□□□□ -0.08
UBE3D-207ENST00000509102 A0A1W2PN81 502 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 IGKV1-16P04430 117 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 RRASP10301 218 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 CHRNA7P36544 502 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 LGALS7P47929 136 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 PSG5Q15238 335 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 IDNKQ5T6J7 187 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 ZNF562Q6V9R5 426 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 ADTRPQ96IZ2 230 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 CLCC1Q96S66 551 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 SDHAF2Q9NX18 166 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 RHBDL2Q9NX52 303 aa14.57□□□□□ -0.08
UBE3D-207ENST00000509102 TMEM127O75204 238 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 PROP1O75360 226 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 IGLV1-40P01703 118 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 HOXD3P31249 432 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-207ENST00000509102 RAB9AP51151 201 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 CRIP2P52943 208 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-207ENST00000509102 PPP1R27Q86WC6 154 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 MINDY2Q8NBR6 621 aa14.56□□□□□ -0.08
UBE3D-207ENST00000509102 A0A087WXM4 84 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 TMEM235A6NFC5 223 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 SLC25A17O43808 307 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 TNFAIP8O95379 198 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 CNIH1O95406 144 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 CA2P00918 260 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 OR8U8P0C7N1 319 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 NDPQ00604 133 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 EGFEM1PQ0D2K5 195 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 DCTN2Q13561 401 aaKnown RBP14.55□□□□□ -0.08
UBE3D-207ENST00000509102 ACTBL2Q562R1 376 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 UNQ5815/PRO19632Q6UWF5 114 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 CROCCP3Q8IVE0 287 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 H1FOOQ8IZA3 346 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-207ENST00000509102 ZNF491Q8N8L2 437 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 OR11H1Q8NG94 326 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 MYOZ3Q8TDC0 251 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 ARPC1AQ92747 370 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 HARBI1Q96MB7 349 aa14.55□□□□□ -0.08
UBE3D-207ENST00000509102 A0A0A6YYH2 397 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 A6NJ64 397 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 FCN1O00602 326 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 SHOXO15266 292 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 SLC22A5O76082 557 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 LUMP51884 338 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-207ENST00000509102 AKIRIN2Q53H80 203 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 C9orf66Q5T8R8 295 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 CNIH2Q6PI25 160 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 OR1N2Q8NGR9 330 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 NUDCD2Q8WVJ2 157 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 KLK15Q9H2R5 256 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 DIABLOQ9NR28 239 aa14.54□□□□□ -0.08
UBE3D-207ENST00000509102 ELF5Q9UKW6 265 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-207ENST00000509102 CLEC2LP0C7M8 214 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 LINC00205P59089 165 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 RUNX1Q01196 453 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 ZNF616Q08AN1 781 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 FXYD3Q14802 87 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 ZNF260Q3ZCT1 412 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 DEFB121Q5J5C9 76 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 BVESQ8NE79 360 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 TSPAN14Q8NG11 270 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 GRPEL2Q8TAA5 225 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 SLA2Q9H6Q3 261 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 RNF167Q9H6Y7 350 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 FBXO7Q9Y3I1 522 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 NUBP2Q9Y5Y2 271 aa14.53□□□□□ -0.08
UBE3D-207ENST00000509102 IGKV1D-8A0A087WSZ0 117 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 SEC14L6B5MCN3 397 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 AIREO43918 545 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 RAMP3O60896 148 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 ARPC4P59998 168 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 GNB1P62873 340 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 DGCR2P98153 550 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 FHL3Q13643 280 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 VMA21Q3ZAQ7 101 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 ZNF645Q8N7E2 425 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 LFNGQ8NES3 379 aa14.52□□□□□ -0.09
UBE3D-207ENST00000509102 OR5B12Q96R08 314 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms