RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 HIST1H1AQ02539 215 aaPredicted RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 RELAQ04206 551 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 HTR4Q13639 388 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 ENDOGQ14249 297 aaKnown RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 SSX1Q16384 188 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF239Q16600 458 aaKnown RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 HES3Q5TGS1 186 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 HAGHLQ6PII5 290 aaPredicted RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 C19orf48Q6RUI8 117 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 HRCT1Q6UXD1 115 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 TCF23Q7RTU1 214 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 KRTCAP2Q8N6L1 136 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 OR13C8Q8NGS7 320 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 TWIST2Q8WVJ9 160 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 ITLN1Q8WWA0 313 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 DCUN1D4Q92564 292 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 NARS2Q96I59 477 aaKnown RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 ANAPC13Q9BS18 74 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 YIPF3Q9GZM5 350 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 EIF5A2Q9GZV4 153 aaKnown RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 PBOV1Q9GZY1 135 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 LPAR5Q9H1C0 372 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 Q9H3A6 140 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 JPT2Q9H910 190 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 CACYBPQ9HB71 228 aaKnown RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 NEUROG3Q9Y4Z2 214 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 TNS3Q68CZ2 1445 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 SSH2Q76I76 1423 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 THSD7BQ9C0I4 1608 aa3.15□□□□□ -1.91
SMARCA5-202ENST00000508573 VIRMAQ69YN4 1812 aaKnown RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 IBTKQ9P2D0 1353 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 SETD1AO15047 1707 aaKnown RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TRAV4A0A0B4J268 109 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 A0A1B0GW64 132 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 CLDN25C9JDP6 229 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 M0R381 172 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 DNASE2O00115 360 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 AIPO00170 330 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 LGALS9O00182 355 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 SLC22A1O15245 554 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 COX7A2P2O60397 106 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF354AO60765 605 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF253O75346 499 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 BANF1O75531 89 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 FSTL3O95633 263 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 BGLAPP02818 100 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 SOD3P08294 240 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TDGF1P13385 188 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 AKR1D1P51857 326 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TDGF1P3P51864 188 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 LINC00313P59037 77 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 RAP1AP62834 184 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TIMM50Q3ZCQ8 353 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 PRR30Q53SZ7 412 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 CASC10Q5T4H9 136 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 PRSS54Q6PEW0 395 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 IL34Q6ZMJ4 242 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF664Q8N3J9 261 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 OR51H1Q8NH63 302 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 FAM104AQ969W3 186 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 MALSU1Q96EH3 234 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ADAT3Q96EY9 351 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 ERMAPQ96PL5 475 aaPredicted RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 OR5M11Q96RB7 305 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 NDFIP1Q9BT67 221 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TMEM70Q9BUB7 260 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 SMIM3Q9BZL3 60 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 SLC25A22Q9H936 323 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 CXorf21Q9HAI6 301 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 GPR84Q9NQS5 396 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 FAM49BQ9NUQ9 324 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 DHCR7Q9UBM7 475 aaKnown RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 RPS6KB2Q9UBS0 482 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 TRAPPC2LQ9UL33 140 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 CYSLTR1Q9Y271 337 aa3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 YLPM1P49750 1951 aaKnown RBP3.14□□□□□ -1.91
SMARCA5-202ENST00000508573 REREQ9P2R6 1566 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 MYH15Q9Y2K3 1946 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 TECPR2O15040 1411 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 FAM135BQ49AJ0 1406 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 ERBINQ96RT1 1412 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 MYH10P35580 1976 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 IGHV3-35A0A0C4DH35 117 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 A0A0J9YY10 115 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 A0A1B0GX78 115 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 DUXBA0A1W2PPF3 345 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 RIIAD1A6NNX1 92 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CD300LBA8K4G0 201 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 C9JAW5 83 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 KRBOX1C9JBD0 128 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 PIRO00625 290 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CXorf1O96002 111 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 TSPAN19P0C672 248 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 PGAM2P15259 253 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms