RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 E9PI62 339 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 CNIH1O95406 144 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 LALBAP00709 142 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 GLAP06280 429 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 PSMA1P25786 263 aaKnown RBP7.1□□□□□ -1.27
NEDD9-211ENST00000508546 BDKRB2P30411 391 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 MC5RP33032 325 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 SOX2P48431 317 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 CD81P60033 236 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 VBP1P61758 197 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 NCS1P62166 190 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 LSM3P62310 102 aaKnown RBP7.1□□□□□ -1.27
NEDD9-211ENST00000508546 TPBGQ13641 420 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 TATDN3Q17R31 274 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 RAB12Q6IQ22 244 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 ZFP41Q8N8Y5 198 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 POC5Q8NA72 575 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 GPR148Q8TDV2 347 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 RGP1Q92546 391 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-211ENST00000508546 NEURL2Q9BR09 285 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 OR51E2Q9H255 320 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 KCNIP1Q9NZI2 227 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 PIPOXQ9P0Z9 390 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 PEX16Q9Y5Y5 336 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 HSPG2P98160 4391 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 H0YJW9 148 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 RAB29O14966 203 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 DEDDO75618 318 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 OR2A4O95047 310 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 MAS1P04201 325 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 GSTP1P09211 210 aaKnown RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 CT45A6P0DMU7 189 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 CT45A5P0DMU8 189 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 CT45A7P0DMV0 189 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF182P17025 639 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 CELP19835 753 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 AADACP22760 399 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 GBX2P52951 348 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 RPS25P62851 125 aaKnown RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 PPP3R1P63098 170 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF343Q6P1L6 599 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 OR2AK2Q8NG84 335 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 GHSRQ92847 366 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 GALMQ96C23 342 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 IFI27L2Q9H2X8 130 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF355PQ9NSJ1 428 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 BABAM2Q9NXR7 383 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 SLC2A8Q9NY64 477 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 METTL1Q9UBP6 276 aaKnown RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 PEF1Q9UBV8 284 aaKnown RBP7.09□□□□□ -1.27
NEDD9-211ENST00000508546 SLC23A1Q9UHI7 598 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 WASHC3Q9Y3C0 194 aa7.09□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF785A8K8V0 405 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 OR11H12B2RN74 326 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 H7C2Y5 167 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 GPX5O75715 221 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 SPDEFO95238 335 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 CA2P00918 260 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 CD7P09564 240 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 FSTP19883 344 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 FUT3P21217 361 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 TGFBR1P36897 503 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 PSG5Q15238 335 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 RPEL1Q2QD12 228 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 DMKNQ6E0U4 476 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-211ENST00000508546 SIGIRRQ6IA17 410 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 C5orf24Q7Z6I8 188 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 DEFB125Q8N687 156 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
NEDD9-211ENST00000508546 TMEM203Q969S6 136 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 CLCC1Q96S66 551 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
NEDD9-211ENST00000508546 CENPOQ9BU64 300 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 DCSTAMPQ9H295 470 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 PEMTQ9UBM1 199 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 SSR3Q9UNL2 185 aa7.08□□□□□ -1.28
NEDD9-211ENST00000508546 UBE2QL1A1L167 161 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 ITGB1BP1O14713 200 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 TRBV12-3P01733 135 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 IGFBP3P17936 291 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-211ENST00000508546 SERPINB10P48595 397 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 FABP5Q01469 135 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 DYRK1AQ13627 763 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 FXYD3Q14802 87 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 TRAM1Q15629 374 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 HMGN3Q15651 99 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-211ENST00000508546 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 RPL39P5Q59GN2 51 aa7.07□□□□□ -1.28
NEDD9-211ENST00000508546 RPL22L1Q6P5R6 122 aaKnown RBP7.07□□□□□ -1.28
NEDD9-211ENST00000508546 CEMP1Q6PRD7 247 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms