RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MIDNQ504T8 468 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SPANXN1Q5VSR9 72 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 LINC00528Q8N1L1 170 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RHOXF1Q8NHV9 184 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 DEDD2Q8WXF8 326 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SMIM12Q96EX1 92 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 MS4A10Q96PG2 267 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 NIPSNAP1Q9BPW8 284 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM38AQ9H6F2 299 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TAS2R4Q9NYW5 299 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 R4GMQ9 66 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ELOA3CA0A087WX78 387 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 A0A1B0GU03 582 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 A8MZ25 164 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 FFAR1O14842 300 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SPRY1O43609 319 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ISG15P05161 165 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 CGB7P0DN87 165 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 CDK5Q00535 292 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ATP5G2Q06055 141 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ENDOGQ14249 297 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM78Q5T7P6 136 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OTPQ5XKR4 325 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 WDFY1Q8IWB7 410 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RPRMLQ8N4K4 120 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OR1L8Q8NGR8 309 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM54Q969K7 222 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM18Q96B42 140 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 DOK5Q9P104 306 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 EXOGQ9Y2C4 368 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RAI1Q7Z5J4 1906 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TRGV2A0A075B6R0 118 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF705GA8MUZ8 300 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 MPTX1A8MV57 137 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 C19orf84I3L1E1 186 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 HAND1O96004 215 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SULT1A3P0DMM9 295 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SULT1A4P0DMN0 295 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ATF1P18846 271 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ELK1P19419 428 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 NTF3P20783 257 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 FGF7P21781 194 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TDGF1P3P51864 188 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 CACNG7P62955 275 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 EMX1Q04741 257 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SLC25A53Q5H9E4 307 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RELL2Q8NC24 303 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 APCDD1LQ8NCL9 501 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OR2G3Q8NGZ4 309 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM45BQ96B21 275 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 NUDT11Q96G61 164 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 COQ2Q96H96 371 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF385AQ96PM9 386 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SORT1Q99523 831 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 GMPR2Q9P2T1 348 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 C7orf72A4D263 438 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RFPL4AA6NLU0 287 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RFPL4AL1F8VTS6 287 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 K7N7A8 449 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 BMPR1BO00238 502 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 IGKV3-20P01619 116 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS2P07478 247 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ALDOCP09972 364 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 STAG3L2P0CL84 134 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 CAMPP49913 170 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RAG2P55895 527 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 LRRC75BQ2VPJ9 315 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 STHQ8IWL8 128 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OR13A1Q8NGR1 328 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 GNPNAT1Q96EK6 184 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ADGRL4Q9HBW9 690 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ANXA10Q9UJ72 324 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ASPDHA6ND91 283 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 E7EQL1 145 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 GASTP01350 101 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RNASE1P07998 156 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 CELA3BP08861 270 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 JUNBP17275 347 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SHC1P29353 583 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 REG1BP48304 166 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 RFX2P48378 723 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF137PP52743 207 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 UCP3P55916 312 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 H3F3AP84243 136 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OR4A47Q6IF82 309 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS57Q6UWY2 283 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SLC35E3Q7Z769 313 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 KIR3DL3Q8N743 410 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SGK494Q96LW2 274 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 TSPAN32Q96QS1 320 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 OR2D2Q9H210 308 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 DOCK11Q5JSL3 2073 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 C2CD3Q4AC94 2353 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 C4orf51C9J302 202 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SLC17A3O00476 420 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 RER1O15258 196 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 CECR9P0C854 216 aa2.51□□□□□ -2.01
NEDD4-208ENST00000508342 SNRPBP14678 240 aaKnown RBP2.51□□□□□ -2.01
NEDD4-208ENST00000508342 PIGPP57054 158 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms