RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 KCNIP2Q9NS61 270 aa2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 MTFP1Q9UDX5 166 aa2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 LINC00527Q9UJ94 153 aa2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 DCCP43146 1447 aa2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 ARHGEF28Q8N1W1 1705 aaKnown RBP2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 MYH11P35749 1972 aa2.81□□□□□ -1.96
HMGB3P15-201ENST00000507326 MYH9P35579 1960 aaKnown RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 DOCK5Q9H7D0 1870 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ITGB4P16144 1822 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 RICTORQ6R327 1708 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 CLTCQ00610 1675 aaKnown RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 MAP3K4Q9Y6R4 1608 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ADGRB3O60242 1522 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 EFCAB6Q5THR3 1501 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 CD109Q6YHK3 1445 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGKV1D-8A0A087WSZ0 117 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 MEIKINA0A087WXM9 373 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGHV1-69DA0A0B4J2H0 117 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGHV1-69-2A0A0G2JMI3 117 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 WI2-2373I1.2A0A1W2PRP0 233 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 PLAC8L1A1L4L8 177 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 MYBPHLA2RUH7 354 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SIGLEC16A6NMB1 481 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 BTNL10A8MVZ5 291 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 K7ENP7 123 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 TCF21O43680 179 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 COX7A2P2O60397 106 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 NPIPB7O75200 414 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 OR2H2O95918 312 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SCTP09683 121 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 UCHL1P09936 223 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 FGF6P10767 208 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 LAMP1P11279 417 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 GFERP55789 205 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 NDUFA6P56556 154 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SYNJ2BPP57105 145 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 CACNG7P62955 275 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 RPS21P63220 83 aaKnown RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 RUNX3Q13761 415 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 HERPUD1Q15011 391 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 OCIAD2Q56VL3 154 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SPATA31B1PQ5VZV4 182 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 LCN8Q6JVE9 175 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 PTAR1Q7Z6K3 402 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZNF695Q8IW36 515 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 TMEM86AQ8N2M4 240 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 TMEM229BQ8NBD8 167 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 LY6G5BQ8NDX9 201 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 OR5W2Q8NH69 310 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 GPR119Q8TDV5 335 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 DCAKDQ8WVC6 231 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 MS4A6EQ96DS6 147 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SLC25A44Q96H78 314 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 GABARAPL3Q9BY60 117 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SMIM3Q9BZL3 60 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 MED28Q9H204 178 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 EDA2RQ9HAV5 297 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 POPDC3Q9HBV1 291 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SIX2Q9NPC8 291 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZNF331Q9NQX6 463 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 PARP11Q9NR21 331 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 TMEM38BQ9NVV0 291 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZNF226Q9NYT6 803 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 TVP23BQ9NYZ1 205 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ERG28Q9UKR5 140 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 POMPQ9Y244 141 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 SIGLEC7Q9Y286 467 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZFP30Q9Y2G7 519 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 ZNF256Q9Y2P7 627 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 PXMP4Q9Y6I8 212 aa2.8□□□□□ -1.96
HMGB3P15-201ENST00000507326 KDM5AP29375 1690 aaKnown RBP2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 LMTK2Q8IWU2 1503 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 NRXN1Q9ULB1 1477 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 SSH2Q76I76 1423 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 ANKRD50Q9ULJ7 1429 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 ABCC12Q96J65 1359 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 TRAV19A0A0A6YYK7 116 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGHV2-26A0A0B4J1V2 119 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 TRAV38-1A0A0B4J264 116 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 FAM236DA0A1B0GTK5 79 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 LOC389332A0A1B0GUA5 103 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 TMEM269A0A1B0GVZ9 245 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 DUXBA0A1W2PPF3 345 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 SHISA9B4DS77 424 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 C9JQL5 133 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 CORTO00230 105 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 OR7C2O60412 319 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 SS18L1O75177 396 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 DPM2O94777 84 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 KBTBD11O94819 623 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 APOMO95445 188 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 DUS4LO95620 317 aaKnown RBP2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGF2P01344 180 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 IGHMP01871 453 aa2.79□□□□□ -1.96
HMGB3P15-201ENST00000507326 FABP3P05413 133 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms