RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PROK2Q9HC23 129 aa4.95□□□□□ -1.62
CLDND1-213ENST00000506927 PPP1R14DQ9NXH3 145 aa4.95□□□□□ -1.62
CLDND1-213ENST00000506927 DLL3Q9NYJ7 618 aa4.95□□□□□ -1.62
CLDND1-213ENST00000506927 MTCH1Q9NZJ7 389 aa4.95□□□□□ -1.62
CLDND1-213ENST00000506927 KLF13Q9Y2Y9 288 aaPredicted RBP4.95□□□□□ -1.62
CLDND1-213ENST00000506927 RP1P56715 2156 aa4.95□□□□□ -1.62
CLDND1-213ENST00000506927 MDFIC2A0A1B0GVS7 189 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 C21orf140B9A014 251 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 FNDC10F2Z333 226 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 M0R143 59 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 NTN3O00634 580 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 HS3ST1O14792 307 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 SPINT2O43291 252 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 SS18L1O75177 396 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 RBMXL2O75526 392 aaKnown RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 NXPH2O95156 264 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 MT-ND6P03923 174 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 UMODP07911 640 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 KLK2P20151 261 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 GZMHP20718 246 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 KITLGP21583 273 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CDC34P49427 236 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TNFSF10P50591 281 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CNN1P51911 297 aaKnown RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 ERVFC1-1P60608 527 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 SPCS3P61009 180 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 UBE2NP61088 152 aaKnown RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 RUNX1Q01196 453 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TMEM267Q0VDI3 215 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 VWC2Q2TAL6 325 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 HLA-BQ31612 363 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TMEM30BQ3MIR4 351 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 PDLIM3Q53GG5 364 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 FFAR4Q5NUL3 377 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 FAM162BQ5T6X4 162 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 WDR73Q6P4I2 378 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 C16orf82Q7Z2V1 217 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 FAM90A1Q86YD7 464 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CPEB3Q8NE35 698 aaKnown RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 OR5AN1Q8NGI8 311 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 Q8TCH9 128 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 DTD1Q8TEA8 209 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 ABHD5Q8WTS1 349 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 IL1F10Q8WWZ1 152 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CFHR4Q92496 578 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 ZNF845Q96IR2 970 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 POM121L2Q96KW2 1035 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 FER1L6-AS2Q96M78 137 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 OR4C12Q96R67 309 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CHRDL1Q9BU40 450 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 DDA1Q9BW61 102 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 SFXN3Q9BWM7 321 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 RBKSQ9H477 322 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 PRDM13Q9H4Q3 707 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 ZNF665Q9H7R5 613 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 ZNF703Q9H7S9 590 aaPredicted RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 OR6C3Q9NZP0 311 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 PILRBQ9UKJ0 227 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 GAB2Q9UQC2 676 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 PPP1R3CQ9UQK1 317 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 F5P12259 2224 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TNRC6BQ9UPQ9 1833 aaKnown RBP4.94□□□□□ -1.62
CLDND1-213ENST00000506927 KIAA1549Q9HCM3 1950 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CENPFP49454 3210 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 CEP350Q5VT06 3117 aa4.94□□□□□ -1.62
CLDND1-213ENST00000506927 TNRC6AQ8NDV7 1962 aaKnown RBP4.93□□□□□ -1.62
CLDND1-213ENST00000506927 TRAV24A0A0B4J272 114 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 IGKV1D-13A0A0B4J2D9 117 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 UBE2L5PA0A1B0GUS4 154 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 C5orf63A6NC05 138 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 ZNF705GA8MUZ8 300 aaPredicted RBP4.93□□□□□ -1.62
CLDND1-213ENST00000506927 A8MWP6 167 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 C11orf94C9JXX5 98 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 PHOX2AO14813 284 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 RBFOX2O43251 390 aaKnown RBP eCLIP4.93□□□□□ -1.62
CLDND1-213ENST00000506927 TNFSF12O43508 249 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 WDR1O75083 606 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 NGFP01138 241 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 GYPAP02724 150 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 SOD3P08294 240 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 IGKV1-13P0DP09 117 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 PAX1P15863 534 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 OPRK1P41145 380 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 THBS3P49746 956 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 RAB7AP51149 207 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 RHOBP62745 196 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 RPL23P62829 140 aaKnown RBP4.93□□□□□ -1.62
CLDND1-213ENST00000506927 HTD2P86397 168 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 PAX5Q02548 391 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 HERPUD1Q15011 391 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 TGIF1Q15583 401 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 OR1C1Q15619 314 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 TMEM183BQ1AE95 376 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 C9orf152Q5JTZ5 239 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 ACTL10Q5JWF8 245 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 PMS2CLQ68D20 193 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 ZNF343Q6P1L6 599 aa4.93□□□□□ -1.62
CLDND1-213ENST00000506927 INO80CQ6PI98 192 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms