RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TCTEX1D1Q8N7M0 179 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 GRPEL2Q8TAA5 225 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 ISOC1Q96CN7 298 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 FLYWCH2Q96CP2 140 aaKnown RBP4.45□□□□□ -1.7
GYPB-205ENST00000505583 FAM110AQ9BQ89 295 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 UQCC2Q9BRT2 126 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 SMPD3Q9NY59 655 aaPredicted RBP4.45□□□□□ -1.7
GYPB-205ENST00000505583 PIPOXQ9P0Z9 390 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 STUB1Q9UNE7 303 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 ERGIC3Q9Y282 383 aa4.45□□□□□ -1.7
GYPB-205ENST00000505583 EXOSC1Q9Y3B2 195 aaKnown RBP4.45□□□□□ -1.7
GYPB-205ENST00000505583 TNCP24821 2201 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 FOXI3A8MTJ6 420 aaPredicted RBP4.44□□□□□ -1.7
GYPB-205ENST00000505583 TMEM14DPA8MWL7 114 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 SOCS1O15524 211 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 IGLV2-23P01705 113 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 TFAP2AP05549 437 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 CRYGBP07316 175 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 CSN3P07498 182 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 H2AFB1P0C5Y9 115 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 H2AFB2P0C5Z0 115 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 APELAP0DMC3 54 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 EDN2P20800 178 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 MC5RP33032 325 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 CEACAM6P40199 344 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 SYNJ2BPP57105 145 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
GYPB-205ENST00000505583 FXYD3Q14802 87 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 CT83Q5H943 113 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 C1orf100Q5SVJ3 147 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 PYHIN1Q6K0P9 492 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 LINC00322Q6ZN03 302 aaPredicted RBP4.44□□□□□ -1.7
GYPB-205ENST00000505583 SGPP2Q8IWX5 399 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 NKAIN3Q8N8D7 197 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 POC5Q8NA72 575 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 ZNF555Q8NEP9 628 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 OR9G4Q8NGQ1 327 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 C5orf30Q96GV9 206 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 NEDD4LQ96PU5 975 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 GFI1Q99684 422 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 SPATA25Q9BR10 227 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 ELOVL1Q9BW60 279 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 TM2D1Q9BX74 207 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 LPAR5Q9H1C0 372 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 SLA2Q9H6Q3 261 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 RANGRFQ9HD47 186 aaPredicted RBP4.44□□□□□ -1.7
GYPB-205ENST00000505583 ZNF355PQ9NSJ1 428 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 ABRACLQ9P1F3 81 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 STEAP1Q9UHE8 339 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 AK3Q9UIJ7 227 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 LRRC42Q9Y546 428 aa4.44□□□□□ -1.7
GYPB-205ENST00000505583 TRBV6-6A0A0A6YYG2 114 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 IRGMA1A4Y4 181 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 RBMY1BA6NDE4 496 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 RBMY1EA6NEQ0 496 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 EFCAB10A6NFE3 127 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 ITGB1BP1O14713 200 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 SLC22A1O15245 554 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 RBBP9O75884 186 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 CD1AP06126 327 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 CD3GP09693 182 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 RBMY1DP0C7P1 496 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 CD37P11049 281 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 ZP3P21754 424 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 TMEM50BP56557 158 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 WNT4P56705 351 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 HLA-DRB3P79483 266 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 PLA2G7Q13093 441 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 P2RY14Q15391 338 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 ACSM3Q53FZ2 586 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 ZNF343Q6P1L6 599 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 AHSA2Q719I0 299 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 FAM89BQ8N5H3 189 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 CYGBQ8WWM9 190 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 PTX4Q96A99 478 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 C16orf92Q96LL3 132 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 TSNAXQ99598 290 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 RNF5Q99942 180 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 TMED9Q9BVK6 235 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 TMEM59Q9BXS4 323 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 WFDC10AQ9H1F0 79 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 PLEKHA3Q9HB20 300 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 CHMP1AQ9HD42 196 aaPredicted RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 Q9N2K0 584 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 CHCHD3Q9NX63 227 aaKnown RBP4.43□□□□□ -1.7
GYPB-205ENST00000505583 GHRLQ9UBU3 117 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 PSORS1C1Q9UIG5 152 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 SELENOKQ9Y6D0 94 aa4.43□□□□□ -1.7
GYPB-205ENST00000505583 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
GYPB-205ENST00000505583 C13orf42A0A1B0GVH6 325 aa4.42□□□□□ -1.7
GYPB-205ENST00000505583 ZNF785A8K8V0 405 aa4.42□□□□□ -1.7
GYPB-205ENST00000505583 M0R1X1 148 aa4.42□□□□□ -1.7
GYPB-205ENST00000505583 SPDEFO95238 335 aa4.42□□□□□ -1.7
GYPB-205ENST00000505583 CNIH1O95406 144 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms