RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 C1DQ13901 141 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 HIST3H3Q16695 136 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 LGALSLQ3ZCW2 172 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 TRMT12Q53H54 448 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 TMEM97Q5BJF2 176 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 FAM162BQ5T6X4 162 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 CLEC20AQ6ZU45 233 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 MARCH3Q86UD3 253 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 LRP11Q86VZ4 500 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 EIF4E3Q8N5X7 224 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 OR4X1Q8NH49 305 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 SCGB1C1Q8TD33 95 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 CYGBQ8WWM9 190 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 PPP1R2P1Q96PQ5 205 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 DCSTAMPQ9H295 470 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 PARVAQ9NVD7 372 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 ARMC1Q9NVT9 282 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 POLR1DQ9Y2S0 133 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 UFC1Q9Y3C8 167 aa2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 LSM5Q9Y4Y9 91 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 YLPM1P49750 1951 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-206ENST00000504751 MYO15BQ96JP2 1530 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 IGLV10-54A0A075B6I4 117 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 A0A0B4J2C4 111 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 OR4C46A6NHA9 309 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 FAM183AA6NL82 134 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 I3L4J1 428 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 IFNA21P01568 189 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 LINC00614P0C842 121 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 AGTR1P30556 359 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 MAP2K4P45985 399 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 ZNF83P51522 516 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 RWDD2BP57060 319 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 SLC35A2P78381 396 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 EDDM3AQ14507 147 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 JOSD1Q15040 202 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 CENPWQ5EE01 88 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 ELP2Q6IA86 826 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 SPNS3Q6ZMD2 512 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 OLIG3Q7RTU3 272 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 SLC36A1Q7Z2H8 476 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 LYPD6Q86Y78 171 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 PHF13Q86YI8 300 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 ZIC4Q8N9L1 334 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 OR10K1Q8NGX5 313 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 TWIST2Q8WVJ9 160 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 PYURFQ96I23 114 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 DDA1Q9BW61 102 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 GABARAPL1Q9H0R8 117 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 RNASE7Q9H1E1 156 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 SSH2Q76I76 1423 aa2.42□□□□□ -2.02
TRAPPC13-206ENST00000504751 PEG3Q9GZU2 1588 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 ZSWIM8A7E2V4 1837 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 TRAV8-3A0A0A6YYJ7 113 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 A0A1B0GV72 72 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 FAM159BA6NKW6 160 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 H3BMM0 161 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 SYNGR2O43760 224 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 GTF2F2P13984 249 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 RAB4BP61018 213 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 RAB5BP61020 215 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 GTF2BQ00403 316 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 CDK10Q15131 360 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 ACOT6Q3I5F7 207 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 C3orf33Q6P1S2 294 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 DOLPP1Q86YN1 238 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 BPIFB6Q8NFQ5 453 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 MFSD8Q8NHS3 518 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 MAL2Q969L2 176 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 UBE2WQ96B02 151 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 OLFM3Q96PB7 478 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 TBX5Q99593 518 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 FAM107BQ9H098 131 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 BOLA2Q9H3K6 86 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 IDI2-AS1Q9NZ38 188 aa2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 MCTS1Q9ULC4 181 aaKnown RBP2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 FAM32AQ9Y421 112 aaKnown RBP2.41□□□□□ -2.02
TRAPPC13-206ENST00000504751 NACADO15069 1562 aa2.4□□□□□ -2.02
TRAPPC13-206ENST00000504751 PRR14LQ5THK1 2151 aa2.4□□□□□ -2.02
TRAPPC13-206ENST00000504751 SCN10AQ9Y5Y9 1956 aa2.4□□□□□ -2.02
TRAPPC13-206ENST00000504751 DOCK5Q9H7D0 1870 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 PGPA6NDG6 321 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 EEF1E1-BLOC1S5C9J1V9 151 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 ARPC5O15511 151 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 EEF1E1O43324 174 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 NOS1APO75052 506 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 OR2B3O76000 313 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 DHFRP00374 187 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 CD36P16671 472 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 GZMHP20718 246 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 SERPINB1P30740 379 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 OR1E2P47887 323 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 CTBP2P56545 445 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 H2BFSP57053 126 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 RAB25P57735 213 aa2.4□□□□□ -2.03
TRAPPC13-206ENST00000504751 DEFA1P59665 94 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms