RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 IGHV1-8P0DP01 117 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 CCL3L1P16619 93 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 ZNF16P17020 682 aaPredicted RBP10.89□□□□□ -0.67
LMNA-220ENST00000504687 AKR1C2P52895 323 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 AP2S1P53680 142 aaPredicted RBP10.89□□□□□ -0.67
LMNA-220ENST00000504687 TAS2R30P59541 319 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
LMNA-220ENST00000504687 LTC4SQ16873 150 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 MIDNQ504T8 468 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 CLLU1Q5K131 121 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 NCR3LG1Q68D85 454 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 OR9G1Q8NH87 305 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 ST8SIA2Q92186 375 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 RAB40CQ96S21 281 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 S1PR3Q99500 378 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 CYTL1Q9NRR1 136 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
LMNA-220ENST00000504687 SESN1Q9Y6P5 492 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 PPIHO43447 177 aaKnown RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 CFDP00746 253 aaPredicted RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 RRASP10301 218 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 NFYBP25208 207 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 CXorf66Q5JRM2 361 aaPredicted RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 BTNL3Q6UXE8 466 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 Q6ZRM9 215 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 OR4S2Q8NH73 311 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 ST6GALNAC6Q969X2 333 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 TMEM186Q96B77 213 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 LYRM2Q9NU23 88 aaPredicted RBP10.88□□□□□ -0.67
LMNA-220ENST00000504687 HSPB7Q9UBY9 170 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 CACNG5Q9UF02 275 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 WSB1Q9Y6I7 421 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 ABCA4P78363 2273 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 RELNP78509 3460 aa10.88□□□□□ -0.67
LMNA-220ENST00000504687 hCG_1809904A0A1W2PP81 198 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 A0A1W2PR64 198 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 A0A1W2PRV1 198 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 J3QR06 171 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 M0R1W7 72 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 S1PR2O95136 353 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 SCGB1D2O95969 90 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
LMNA-220ENST00000504687 BAXQ07812 192 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 RPL39P5Q59GN2 51 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 UTF1Q5T230 341 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
LMNA-220ENST00000504687 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 OR2C3Q8N628 320 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 RNASE11Q8TAA1 199 aaKnown RBP10.87□□□□□ -0.67
LMNA-220ENST00000504687 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 PCGF1Q9BSM1 259 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 SLC25A31Q9H0C2 315 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 TMEM133Q9H2Q1 129 aa10.87□□□□□ -0.67
LMNA-220ENST00000504687 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
LMNA-220ENST00000504687 SPTBN1Q01082 2364 aaKnown RBP10.87□□□□□ -0.67
LMNA-220ENST00000504687 USF3Q68DE3 2245 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 PPIAL4CA0A0B4J2A2 164 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 RPS10-NUDT3A0A1W2PQS6 291 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 MARCH11A6NNE9 402 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 A8MXK9 166 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 SYNGR2O43760 224 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 MED6O75586 246 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 JTBO76095 146 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 LIPFP07098 398 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 RNF224P0DH78 156 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 PPIAL4GP0DN37 164 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
LMNA-220ENST00000504687 PAX1P15863 534 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 NQO2P16083 231 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 PAX9P55771 341 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 POLR2GP62487 172 aaKnown RBP eCLIP10.86□□□□□ -0.67
LMNA-220ENST00000504687 AVPI1Q5T686 147 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 FOXRED2Q8IWF2 684 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 KIR3DL3Q8N743 410 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 BEND2Q8NDZ0 799 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 OR52E5Q8NH55 327 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 LEAP2Q969E1 77 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 R3HDM4Q96D70 268 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 SMIM8Q96KF7 97 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 DOCK11Q5JSL3 2073 aa10.86□□□□□ -0.67
LMNA-220ENST00000504687 YLPM1P49750 1951 aaKnown RBP10.85□□□□□ -0.67
LMNA-220ENST00000504687 DOPEY2Q9Y3R5 2298 aa10.85□□□□□ -0.67
LMNA-220ENST00000504687 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
LMNA-220ENST00000504687 FCGR3BO75015 233 aa10.85□□□□□ -0.67
LMNA-220ENST00000504687 SCAF4O95104 1147 aaKnown RBP10.85□□□□□ -0.67
LMNA-220ENST00000504687 KRASP01116 189 aa10.85□□□□□ -0.67
LMNA-220ENST00000504687 IGLV1-47P01700 117 aa10.85□□□□□ -0.67
LMNA-220ENST00000504687 IL6RP08887 468 aaPredicted RBP10.85□□□□□ -0.67
LMNA-220ENST00000504687 FGF2P09038 288 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms