RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 PLXNB1O43157 2135 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 SLC22A5O76082 557 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 IGKV1-16P04430 117 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 RRASP10301 218 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 CDX1P47902 265 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 LGALS7P47929 136 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 LUMP51884 338 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 PSG5Q15238 335 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 UBE2NLQ5JXB2 153 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 AUNIPQ9H7T9 357 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 METTL1Q9UBP6 276 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 OR2W1Q9Y3N9 320 aa16.6■□□□□ 0.25
TRAPPC11-203ENST00000504526 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 DUS4LO95620 317 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 RPLP1P05386 114 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 PSMB8P28062 276 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 PPIFP30405 207 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 MYCNOSP40205 109 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 CBX5P45973 191 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 CRIP2P52943 208 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 LINC00205P59089 165 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 CX3CL1P78423 397 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 C8orf86Q6ZUL3 223 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 TCTEX1D1Q8N7M0 179 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 BEST4Q8NFU0 473 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 SLC25A46Q96AG3 418 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 WSB1Q9Y6I7 421 aa16.59■□□□□ 0.25
TRAPPC11-203ENST00000504526 XRCC3O43542 346 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 HLA-DQB1P01920 261 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 TMEM267Q0VDI3 215 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 OXLD1Q5BKU9 147 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 ZNF562Q6V9R5 426 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 HOGA1Q86XE5 327 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 ZNF645Q8N7E2 425 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 C5orf30Q96GV9 206 aa16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 RCC1LQ96I51 464 aaKnown RBP16.58■□□□□ 0.24
TRAPPC11-203ENST00000504526 SMIM18P0DKX4 95 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 NFYAP23511 347 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 DUTP33316 252 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 ARPC4P59998 168 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 TMEM177Q53S58 311 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 TMEM65Q6PI78 240 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 ETV3LQ6ZN32 361 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 SAMD12Q8N8I0 201 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 LINC00482Q8N8I6 264 aa16.57■□□□□ 0.24
TRAPPC11-203ENST00000504526 G3V318 75 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 FCN1O00602 326 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 IGLV1-40P01703 118 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 NCS1P62166 190 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 NDPQ00604 133 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 C18orf65Q6ZTR6 163 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 MRPL41Q8IXM3 137 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 MINDY2Q8NBR6 621 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 BVESQ8NE79 360 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 MYOZ3Q8TDC0 251 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 ABHD5Q8WTS1 349 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 HARBI1Q96MB7 349 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 CMTM3Q96MX0 182 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 GPR61Q9BZJ8 451 aa16.56■□□□□ 0.24
TRAPPC11-203ENST00000504526 SLC25A17O43808 307 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 TUSC2O75896 110 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 IGLL1P15814 213 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 VBP1P61758 197 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 ECSCRQ19T08 205 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 LCNL1Q6ZST4 164 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 REC114Q7Z4M0 266 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 PPP1R27Q86WC6 154 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 ANKRD13BQ86YJ7 626 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 GVQW1Q8N7I0 195 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 C4orf3Q8WVX3 66 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 ACOT12Q8WYK0 555 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 DDB2Q92466 427 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 CLCC1Q96S66 551 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 P2RX4Q99571 388 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 MRPS26Q9BYN8 205 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 NECAP2Q9NVZ3 263 aa16.55■□□□□ 0.24
TRAPPC11-203ENST00000504526 J3QRK9 145 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 SHOXO15266 292 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 GABARAPO95166 117 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 CA2P00918 260 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 AKIRIN2Q53H80 203 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 C19orf54Q5BKX5 351 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 TMEM69Q5SWH9 247 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 OSR1Q8TAX0 266 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 UBE2E2Q96LR5 201 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 MCRIP2Q9BUT9 160 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 FOXA2Q9Y261 457 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 RBMX2Q9Y388 322 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 PRELID3BQ9Y3B1 194 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 FBXO7Q9Y3I1 522 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 NUBP2Q9Y5Y2 271 aa16.54■□□□□ 0.24
TRAPPC11-203ENST00000504526 NOTCH3Q9UM47 2321 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 CCL24O00175 119 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 IGLV2-23P01705 113 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 TAS2R20P59543 309 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 VMA21Q3ZAQ7 101 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 PYHIN1Q6K0P9 492 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 ARPC1AQ92747 370 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 IFT46Q9NQC8 304 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms