RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ARF6P62330 175 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 IL15RAQ13261 267 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF585BQ52M93 769 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 RPL39P5Q59GN2 51 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 FAM53AQ6NSI3 398 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 TMEM65Q6PI78 240 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LYZL2Q7Z4W2 148 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 ZBTB8BQ8NAP8 495 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 OR11H6Q8NGC7 330 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LHFPL5Q8TAF8 219 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 DDB2Q92466 427 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LEAP2Q969E1 77 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 C5orf30Q96GV9 206 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 SEC22AQ96IW7 307 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF251Q9BRH9 671 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 COA4Q9NYJ1 87 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 PRR13Q9NZ81 148 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 GSKIPQ9P0R6 139 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 AKAP6Q13023 2319 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 IGHV4-30-2A0A087WSY4 118 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 LINC00473A8K010 186 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 LEUTXA8MZ59 168 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 OOSP1A8MZH6 123 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 B4DSR2 109 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 FAM90A26D6RGX4 464 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 BUB1B-PAK6H3BSN5 160 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 ST8SIA3O43173 380 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 FCGR3BO75015 233 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 PROP1O75360 226 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 MPC2O95563 127 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 IGLV1-47P01700 117 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 GAPDHP04406 335 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 MMP9P14780 707 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 PVALBP20472 110 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 ZFP36P26651 326 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 YLPM1P49750 1951 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 DVL1P1P54792 670 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 RPL30P62888 115 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 LCN2P80188 198 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 PAX2Q02962 417 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF816Q0VGE8 651 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 MINOS1Q5TGZ0 78 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 H2BFWTQ7Z2G1 175 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 PDPNQ86YL7 162 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 TGIF2LXQ8IUE1 241 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 Q8N7P7 452 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 INO80EQ8NBZ0 244 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 OR5AN1Q8NGI8 311 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 OR4D5Q8NGN0 318 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 ST6GALNAC6Q969X2 333 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 GPHA2Q96T91 129 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 LPAR2Q9HBW0 351 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 SLC35D1Q9NTN3 355 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 MINOS1-NBL1R4GNA1 71 aa6.63□□□□□ -1.35
TOPBP1-202ENST00000503338 FXYD6-FXYD2A0A087WZ82 144 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 IGHV4-61A0A0C4DH41 118 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 A0A0D9SG52 128 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 A0A1W2PPE3 182 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 MARCH11A6NNE9 402 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 MPTX1A8MV57 137 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 E5RGE8 158 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 SMLR1H3BR10 107 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 WRBO00258 174 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 MED6O75586 246 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 DEDDO75618 318 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 TOX4O94842 621 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 OR2F2O95006 317 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 S1PR2O95136 353 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 ARG1P05089 322 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CT45A6P0DMU7 189 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CT45A5P0DMU8 189 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CT45A7P0DMV0 189 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 LYL1P12980 280 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 HTR1DP28221 377 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 LGALS4P56470 323 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 LOXL1Q08397 574 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 OR2F1Q13607 317 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF345Q14585 488 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 POU2AF1Q16633 256 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 LRRC37A5PQ49AS3 106 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 PRSS54Q6PEW0 395 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF546Q86UE3 836 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 OR8H3Q8N146 312 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 PNKDQ8N490 385 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 DRAXINQ8NBI3 349 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 OR4C13Q8NGP0 309 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 OR1S1Q8NH92 325 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 NRGNQ92686 78 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 RPEQ96AT9 228 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 GPR146Q96CH1 333 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms