RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CADP27708 2225 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF891A8MT65 544 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-204ENST00000501271 CGAP01215 116 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 NCMAPQ5T1S8 102 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 DTD1Q8TEA8 209 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 LURAP1Q96LR2 239 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 AGMATQ9BSE5 352 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 SIRT7Q9NRC8 400 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 TIMM9Q9Y5J7 89 aa8.22□□□□□ -1.09
CLIP1-204ENST00000501271 CNOT1A5YKK6 2376 aaKnown RBP8.21□□□□□ -1.09
CLIP1-204ENST00000501271 A0A1B0GWJ7 208 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 CXorf65A6NEN9 183 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 RAB29O14966 203 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 HMGB3O15347 200 aaKnown RBP8.21□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF737O75373 536 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 CLN5O75503 358 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 TFF3Q07654 80 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 DEFB109BQ30KR1 87 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 SEM1Q6ZVN7 128 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 BHLHA15Q7RTS1 189 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-204ENST00000501271 H2BFWTQ7Z2G1 175 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 CENPVQ7Z7K6 275 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-204ENST00000501271 MRGPRGQ86SM5 289 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 LRP11Q86VZ4 500 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 OR2Z1Q8NG97 314 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 PLPPR2Q96GM1 343 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 TMEM147Q9BVK8 224 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 SLC25A22Q9H936 323 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 VAX2Q9UIW0 290 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 PROCRQ9UNN8 238 aa8.21□□□□□ -1.09
CLIP1-204ENST00000501271 TET2Q6N021 2002 aaPredicted RBP8.21□□□□□ -1.1
CLIP1-204ENST00000501271 IGKV1D-17A0A075B6S4 117 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 FGF7P21781 194 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 TUBG1P23258 451 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 PRDX2P32119 198 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 TLE1Q04724 770 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 KIAA0141Q14154 515 aaPredicted RBP8.21□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF674Q2M3X9 581 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF66Q6ZN08 573 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 LHX4Q969G2 390 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 P2RX4Q99571 388 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 TUBG2Q9NRH3 451 aa8.21□□□□□ -1.1
CLIP1-204ENST00000501271 B4DEV8 164 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 PROP1O75360 226 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 RBMXL2O75526 392 aaKnown RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 CD81P60033 236 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 PAX5Q02548 391 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SPRNQ5BIV9 151 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 NCR3LG1Q68D85 454 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 ALKBH2Q6NS38 261 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 HSD17B10Q99714 261 aaKnown RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 MRPL37Q9BZE1 423 aaKnown RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 TMPRSS5Q9H3S3 457 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SDF2L1Q9HCN8 221 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SLC25A15Q9Y619 301 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 DSCAMO60469 2012 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 DSCAML1Q8TD84 2053 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 IGHV3OR15-7A0A075B7D8 119 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 AHRRA9YTQ3 701 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SRRM5B3KS81 715 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 CYB5BO43169 146 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SPINT2O43291 252 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 IFNA1P01562 189 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 CTAG1AP78358 180 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 S100A12P80511 92 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 HTD2P86397 168 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 ATP6V1FQ16864 119 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 WDR25Q64LD2 544 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 TCTEX1D1Q8N7M0 179 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 SSX3Q99909 188 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 QTRT1Q9BXR0 403 aaKnown RBP8.2□□□□□ -1.1
CLIP1-204ENST00000501271 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 DUSP13Q9UII6 198 aa8.2□□□□□ -1.1
CLIP1-204ENST00000501271 YIF1AO95070 293 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 CYB5R3P00387 301 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 ADH4P08319 380 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 OR9G9P0C7N8 305 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 DEFA4P12838 97 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 EIF2S3P41091 472 aaKnown RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF83P51522 516 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MEF2BQ02080 365 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 P2RY6Q15077 328 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 VWC2Q2TAL6 325 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 GCSAMQ8N6F7 178 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 Q8TCH9 128 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 R3HDM4Q96D70 268 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 LAMP3Q9UQV4 416 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MGAQ8IWI9 3026 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MBD3L4A6NDZ8 208 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MBD3L3A6NE82 208 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MBD3L5A6NJ08 208 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms