RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TSNAXQ99598 290 aaKnown RBP6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 CABLES2Q9BTV7 478 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 YTHDF1Q9BYJ9 559 aaKnown RBP6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 ATG5Q9H1Y0 275 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 OR2D2Q9H210 308 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 SLC35D1Q9NTN3 355 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 TXNL4BQ9NX01 149 aaKnown RBP6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 METTL1Q9UBP6 276 aaKnown RBP6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 VSIG4Q9Y279 399 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 FBXO7Q9Y3I1 522 aa6.6□□□□□ -1.35
HMGXB4-207ENST00000498212 TRBV6-7A0A0A0MS04 114 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 NOTOA8MTQ0 251 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 M0R1X1 148 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 FCN1O00602 326 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 RAMP3O60896 148 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 SPDEFO95238 335 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 DIRAS3O95661 229 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 CA2P00918 260 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 IGKV1-16P04430 117 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 OR8U8P0C7N1 319 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 OR8U9P0C7N5 309 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 EGR2P11161 476 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 TALDO1P37837 337 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 LUMP51884 338 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 LINC00205P59089 165 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 RUNX1Q01196 453 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 ZNF616Q08AN1 781 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 DCTN2Q13561 401 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 ARL6IP1Q15041 203 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 SRSF7Q16629 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 C19orf54Q5BKX5 351 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 UNQ5815/PRO19632Q6UWF5 114 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 ZNF562Q6V9R5 426 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 TPRA1Q86W33 373 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 OR1N2Q8NGR9 330 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 FLYWCH2Q96CP2 140 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 OR5B12Q96R08 314 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 GINS4Q9BRT9 223 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 FAM103A1Q9BTL3 118 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 CENPOQ9BU64 300 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 ZNF230Q9UIE0 474 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 STUB1Q9UNE7 303 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 SSR3Q9UNL2 185 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 GAB2Q9UQC2 676 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 FOXA2Q9Y261 457 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 NUBP2Q9Y5Y2 271 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 A3GALT2U3KPV4 340 aa6.59□□□□□ -1.35
HMGXB4-207ENST00000498212 SEC14L6B5MCN3 397 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 SLC25A17O43808 307 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 SOX15O60248 233 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 GNB1P62873 340 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 CBX3Q13185 183 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF260Q3ZCT1 412 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 AKIRIN2Q53H80 203 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 PYHIN1Q6K0P9 492 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF773Q6PK81 442 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 Q6ZS49 121 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 PPP1R27Q86WC6 154 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 HARBI1Q96MB7 349 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 TPSG1Q9NRR2 321 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 SDHAF2Q9NX18 166 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 DAPK2Q9UIK4 370 aa6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 ELF5Q9UKW6 265 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-207ENST00000498212 IGKV1D-8A0A087WSZ0 117 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 SCGNO76038 276 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 LGALS1P09382 135 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 RRASP10301 218 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 DTYMKP23919 212 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 CD40LGP29965 261 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 ECI1P42126 302 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 LGALS7P47929 136 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 TAGLNQ01995 201 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 CD69Q07108 199 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 FXYD3Q14802 87 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 RTL8BQ17RB0 113 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 CDNFQ49AH0 187 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 SFXN4Q6P4A7 337 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 H1FOOQ8IZA3 346 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 LFNGQ8NES3 379 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 GRPEL2Q8TAA5 225 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 CASTOR1Q8WTX7 329 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 ARPC1AQ92747 370 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 B9D2Q9BPU9 175 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 ALX4Q9H161 411 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 OR51E2Q9H255 320 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 SLA2Q9H6Q3 261 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 SCOCQ9UIL1 159 aa6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 RRP15Q9Y3B9 282 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-207ENST00000498212 DNAH3Q8TD57 4116 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 LINC01619G3V211 115 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 OVOL1O14753 267 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 ARPC1BO15143 372 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 SHOXO15266 292 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms