RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TAF9BQ9HBM6 251 aa14.44□□□□□ -0.1
PRKCB-209ENST00000498058 RAB9BQ9NP90 201 aa14.44□□□□□ -0.1
PRKCB-209ENST00000498058 AK3Q9UIJ7 227 aa14.44□□□□□ -0.1
PRKCB-209ENST00000498058 MGAT4AQ9UM21 535 aa14.44□□□□□ -0.1
PRKCB-209ENST00000498058 TMEM235A6NFC5 223 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 G3V318 75 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 SPINT2O43291 252 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 LANCL1O43813 399 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 RAMP3O60896 148 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 PPIFP30405 207 aaKnown RBP14.43□□□□□ -0.1
PRKCB-209ENST00000498058 PRSS3P35030 304 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 ECI1P42126 302 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 CBX5P45973 191 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 C6orf183Q5T699 404 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 PYHIN1Q6K0P9 492 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 FAM131AQ6UXB0 335 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 OR8H1Q8NGG4 311 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 MRPL30Q8TCC3 161 aaKnown RBP14.43□□□□□ -0.1
PRKCB-209ENST00000498058 SCPEP1Q9HB40 452 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 MBNL3Q9NUK0 354 aaKnown RBP14.43□□□□□ -0.1
PRKCB-209ENST00000498058 ZNF107Q9UII5 783 aaPredicted RBP14.43□□□□□ -0.1
PRKCB-209ENST00000498058 WSB1Q9Y6I7 421 aa14.43□□□□□ -0.1
PRKCB-209ENST00000498058 SEC14L6B5MCN3 397 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 TXNL1O43396 289 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 VDAC1P21796 283 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 CCDC190Q86UF4 302 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 SNX29P2Q8IUI4 249 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 OR11H1Q8NG94 326 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 S100ZQ8WXG8 99 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 ASCL2Q99929 193 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 NABP2Q9BQ15 211 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 MRPL20Q9BYC9 149 aaKnown RBP14.42□□□□□ -0.1
PRKCB-209ENST00000498058 OR2S2Q9NQN1 319 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 KCNIP1Q9NZI2 227 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 ZNF580Q9UK33 172 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 KCNK7Q9Y2U2 307 aa14.42□□□□□ -0.1
PRKCB-209ENST00000498058 TRBV6-6A0A0A6YYG2 114 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 I3L521 148 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 SULT1C2O00338 296 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 NAPSAO96009 420 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 DTYMKP23919 212 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 PPP1CCP36873 323 aaKnown RBP14.41□□□□□ -0.1
PRKCB-209ENST00000498058 ETV6P41212 452 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 MMDQ15546 238 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 ZNF491Q8N8L2 437 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 U3KQK5 164 aa14.41□□□□□ -0.1
PRKCB-209ENST00000498058 SORL1Q92673 2214 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 IGHV7-81A0A0B4J1V7 117 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ATP6V0E1O15342 81 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 HLA-DQB1P01920 261 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 OR3A3P47888 321 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ACTBP60709 375 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 GNB1P62873 340 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ZNF45Q02386 682 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 DCTN2Q13561 401 aaKnown RBP14.4□□□□□ -0.1
PRKCB-209ENST00000498058 TMEM30BQ3MIR4 351 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 STEAP3Q658P3 488 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ZNF554Q86TJ5 538 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 SETD6Q8TBK2 473 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 OR5B12Q96R08 314 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ABHD14AQ9BUJ0 271 aa14.4□□□□□ -0.1
PRKCB-209ENST00000498058 ZMAT5Q9UDW3 170 aaKnown RBP14.4□□□□□ -0.1
PRKCB-209ENST00000498058 CTDSPLO15194 276 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 IGLV1-40P01703 118 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 NHLRC4P0CG21 123 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-209ENST00000498058 SRSF7Q16629 238 aaKnown RBP eCLIP14.39□□□□□ -0.118e-14■■■■■ 44.3
PRKCB-209ENST00000498058 NUDCD2Q8WVJ2 157 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 FCAMRQ8WWV6 532 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 SOSTQ9BQB4 213 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 OR51J1Q9H342 316 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 IFT46Q9NQC8 304 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 FBXO7Q9Y3I1 522 aa14.39□□□□□ -0.11
PRKCB-209ENST00000498058 HLA-DRB1P01911 266 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 FCGR3AP08637 254 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 NDPQ00604 133 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 PYDC2Q56P42 97 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 ZNF833PQ6ZTB9 187 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 OR1N2Q8NGR9 330 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 UBE2E2Q96LR5 201 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 HDHD3Q9BSH5 251 aaPredicted RBP14.38□□□□□ -0.11
PRKCB-209ENST00000498058 ALX4Q9H161 411 aaPredicted RBP14.38□□□□□ -0.11
PRKCB-209ENST00000498058 JPT1Q9UK76 154 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 V9GYH0 126 aa14.38□□□□□ -0.11
PRKCB-209ENST00000498058 STAB2Q8WWQ8 2551 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 SAA2-SAA4A0A096LPE2 208 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 GABARAPH6UMI1 98 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 SOX15O60248 233 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 YPEL1O60688 119 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 SAA2P0DJI9 122 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-209ENST00000498058 RUNX1Q01196 453 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 SSBP1Q04837 148 aaKnown RBP14.37□□□□□ -0.11
PRKCB-209ENST00000498058 HMGN3Q15651 99 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 C5orf64Q2M2E5 130 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 C19orf54Q5BKX5 351 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 ZNF880Q6PDB4 577 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 GPX8Q8TED1 209 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 SMIM4Q8WVI0 70 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 YPEL2Q96QA6 119 aa14.37□□□□□ -0.11
PRKCB-209ENST00000498058 ABHD1Q96SE0 405 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms