RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ST8SIA2Q92186 375 aa14.59□□□□□ -0.07
CHRNA4-206ENST00000498043 ZNF251Q9BRH9 671 aa14.59□□□□□ -0.07
CHRNA4-206ENST00000498043 MMP24Q9Y5R2 645 aa14.59□□□□□ -0.07
CHRNA4-206ENST00000498043 DOCK11Q5JSL3 2073 aa14.58□□□□□ -0.08
CHRNA4-206ENST00000498043 CLEC9AQ6UXN8 241 aa14.58□□□□□ -0.08
CHRNA4-206ENST00000498043 FAM212BQ9NTI7 297 aaPredicted RBP14.58□□□□□ -0.08
CHRNA4-206ENST00000498043 KLF2Q9Y5W3 355 aaPredicted RBP14.58□□□□□ -0.08
CHRNA4-206ENST00000498043 WRBO00258 174 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 F12P00748 615 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 ID3Q02535 119 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 WDR25Q64LD2 544 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 RAB39BQ96DA2 213 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 PLEKHA2Q9HB19 425 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 GAB2Q9UQC2 676 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 IGHV1-8P0DP01 117 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 EFNA4P52798 201 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 TMEM33P57088 247 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 CD300LFQ8TDQ1 290 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 S1PR3Q99500 378 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 C11orf1Q9H5F2 150 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 PRELID3BQ9Y3B1 194 aa14.57□□□□□ -0.08
CHRNA4-206ENST00000498043 MARCH11A6NNE9 402 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 ATG12O94817 140 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 P0C879 139 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 PVALBP20472 110 aaPredicted RBP14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 GPR6P46095 362 aaPredicted RBP14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 P2RY1P47900 373 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 DLX1P56177 255 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 SRSF1Q07955 248 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 NDUFA5Q16718 116 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 DDB2Q92466 427 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 RBMXL1Q96E39 390 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 SMIM3Q9BZL3 60 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 FBXL17Q9UF56 701 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 SPTAN1Q13813 2472 aaKnown RBP14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 GPR37O15354 613 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 CAV2P51636 162 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 GNB2P62879 340 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 VAMP2P63027 116 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 C11orf42Q8N5U0 333 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 R3HDM4Q96D70 268 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 CYTL1Q9NRR1 136 aa14.56□□□□□ -0.08
CHRNA4-206ENST00000498043 PPIAL4CA0A0B4J2A2 164 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 KIAA1324LA8MWY0 1029 aaPredicted RBP14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 GPR137BO60478 399 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 GOSR1O95249 250 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 TMEM50AO95807 157 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 PPIAL4GP0DN37 164 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 THBS3P49746 956 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 PRB3Q04118 309 aaPredicted RBP14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 TLE4Q04727 773 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 H2BFWTQ7Z2G1 175 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 ZNF383Q8NA42 475 aa14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 BSCL2Q96G97 398 aaPredicted RBP14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 PATZ1Q9HBE1 687 aaKnown RBP14.55□□□□□ -0.08
CHRNA4-206ENST00000498043 MALRD1Q5VYJ5 2156 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 C22orf46C9J442 243 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 CHST1O43916 411 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 HPRT1P00492 218 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 SSX9Q7RTT3 188 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 OR2C3Q8N628 320 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 ZNF525Q8N782 197 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 OR10X1Q8NGY0 326 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 OR4S2Q8NH73 311 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 SCARB1Q8WTV0 552 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 SPOCK3Q9BQ16 436 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 SESN1Q9Y6P5 492 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 TACC2O95359 2948 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 RPS10-NUDT3A0A1W2PQS6 291 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 FAM24AA6NFZ4 105 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 J3QR06 171 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 OVOL3O00110 214 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 RBFOX2O43251 390 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 CRYZL1O95825 349 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 KIR2DS2P43631 304 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 MIDNQ504T8 468 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 VKORC1L1Q8N0U8 176 aa14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 SSBP3Q9BWW4 388 aaPredicted RBP14.54□□□□□ -0.08
CHRNA4-206ENST00000498043 IGSF23A1L1A6 192 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 A1L4Q6 167 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 H3BP45 60 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 EWSR1Q01844 656 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 FAM74A1Q5RGS3 127 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 ZNF833PQ6ZTB9 187 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 ZNF295-AS1Q8N0V1 137 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 ABHD12Q8N2K0 398 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 C8orf46Q8TAG6 207 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 STOML3Q8TAV4 291 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 ADTRPQ96IZ2 230 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 CCL19Q99731 98 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 TMEM133Q9H2Q1 129 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 LYRM2Q9NU23 88 aaPredicted RBP14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 COA4Q9NYJ1 87 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 ONECUT1Q9UBC0 465 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 AKAP6Q13023 2319 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 A0A087X0M5 115 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 A0A1B0GX30 115 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 A0A1W2PPH5 198 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 IAPPP10997 89 aa14.53□□□□□ -0.08
CHRNA4-206ENST00000498043 TPT1P13693 172 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms