RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ACOX3O15254 700 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 DCTN3O75935 186 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CPSF4O95639 269 aaKnown RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 OPN1SWP03999 348 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 PRB1P04280 392 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 TCRBP04435 133 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 REG1AP05451 166 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CALB1P05937 261 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SERPINA6P08185 405 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 IGHV3-30-3P0DP02 117 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 NEFHP12036 1026 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 G0S2P27469 103 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 DDTP30046 118 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 OR10J1P30954 320 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 OPRM1P35372 400 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CA7P43166 264 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 DAPP51397 102 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 NKX2-5P52952 324 aaPredicted RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 AP2S1P53680 142 aaPredicted RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CTBP2P56545 445 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SNAP25P60880 206 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 RANP62826 216 aaKnown RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 RPS24P62847 133 aaKnown RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SLC35A2P78381 396 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 HLA-DRB3P79483 266 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 FADDQ13158 208 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 TMEM31Q5JXX7 168 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 N4BP2L1Q5TBK1 243 aaPredicted RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SPOPLQ6IQ16 392 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CD200R1LQ6Q8B3 271 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 RASSF6Q6ZTQ3 369 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 HS3ST5Q8IZT8 346 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 TMEM161BQ8NDZ6 487 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CCDC112Q8NEF3 446 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 CD200R1Q8TD46 325 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 Q8WTZ3 238 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SLC25A44Q96H78 314 aaPredicted RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 IGF2BP2-AS1Q96M15 143 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 PRAP1Q96NZ9 151 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 OR52B2Q96RD2 323 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 MRPS26Q9BYN8 205 aaKnown RBP0.97□□□□□ -2.25
VPS26A-208ENST00000497022 HRASLSQ9HDD0 168 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 IL20Q9NYY1 176 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 C3orf18Q9UK00 162 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 DKKL1Q9UK85 242 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 ALG5Q9Y673 324 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 PTPRBP23467 1997 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SCN9AQ15858 1988 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SHANK3Q9BYB0 1731 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 PBRM1Q86U86 1689 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SPATA31E1Q6ZUB1 1445 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 ADGRL3Q9HAR2 1447 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 RALGAPA2Q2PPJ7 1873 aa0.97□□□□□ -2.25
VPS26A-208ENST00000497022 SIPA1L1O43166 1804 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 VWDEQ8N2E2 1590 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 PEG3Q9GZU2 1588 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 IGSF23A1L1A6 192 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 LINC00862A6NCI5 91 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 EVPLLA8MZ36 301 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 PSCAO43653 123 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 GSTZ1O43708 216 aaPredicted RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 SYNGR2O43760 224 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 CIAO1O76071 339 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 IFNA6P05013 189 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 RPS17P08708 135 aaKnown RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 RPSAP08865 295 aaKnown RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 CD36P16671 472 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 CDKN2CP42773 168 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 REG1BP48304 166 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 GNG10P50151 68 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 TCL1AP56279 114 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 TSPEAR-AS2P59090 65 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 FGF12P61328 243 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 POLR2GP62487 172 aaKnown RBP eCLIP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 TAF1AQ15573 450 aaPredicted RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 UAP1Q16222 522 aaPredicted RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 KRTAP21-3Q3LHN1 58 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 MRPL51Q4U2R6 128 aaKnown RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 ACSM3Q53FZ2 586 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 C1orf195Q5TG92 126 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 SYPL2Q5VXT5 272 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 NOXRED1Q6NXP6 359 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 SCXQ7RTU7 201 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 SLC51BQ86UW2 128 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 GID4Q8IVV7 300 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 ZNF567Q8N184 647 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 GPR32P1Q8NGA4 272 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 MFSD8Q8NHS3 518 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 JOSD2Q8TAC2 188 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 C16orf78Q8WTQ4 265 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 EEF1AKMT1Q8WVE0 214 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 OR5P3Q8WZ94 311 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 RAD51AP1Q96B01 352 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 DGCR14Q96DF8 476 aaKnown RBP0.96□□□□□ -2.26
VPS26A-208ENST00000497022 MS4A6EQ96DS6 147 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 OR8B2Q96RD0 313 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 TBX5Q99593 518 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 TMEM109Q9BVC6 243 aa0.96□□□□□ -2.26
VPS26A-208ENST00000497022 NKX6-2Q9C056 277 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms