RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 RAB13P51153 203 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 RAG2P55895 527 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 PIGPP57054 158 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 LINC00205P59089 165 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 HES1Q14469 280 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 SP6Q3SY56 376 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 AWAT1Q58HT5 328 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 OR2B11Q5JQS5 317 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 AADACL3Q5VUY0 350 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 HCP5Q6MZN7 132 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 C11orf88Q6PI97 169 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 GLDNQ6ZMI3 551 aaPredicted RBP6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 ZNF818PQ6ZRF7 136 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 SGPP2Q8IWX5 399 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 SLC38A6Q8IZM9 456 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 DRAM1Q8N682 238 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 ZNF645Q8N7E2 425 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 CCDC71LQ8N9Z2 235 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 OR51H1Q8NH63 302 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 CASTOR1Q8WTX7 329 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 TCTEX1D2Q8WW35 142 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 DEDD2Q8WXF8 326 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 MOB3AQ96BX8 217 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 AKR1E2Q96JD6 320 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 GHITMQ9H3K2 345 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 SDHAF2Q9NX18 166 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 GPR132Q9UNW8 380 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 NUBP2Q9Y5Y2 271 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 MTORP42345 2549 aa6.6□□□□□ -1.35
SMARCD3-215ENST00000496530 CUBNO60494 3623 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 OOSP1A8MZH6 123 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 INMT-MINDY4F8WBC2 141 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 MPPED1O15442 326 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 GPR137BO60478 399 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 NDUFB6O95139 128 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 NDUFA7O95182 113 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 ANXA7P20073 488 aaKnown RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 CD24P25063 80 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 CD34P28906 385 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 SLC6A1P30531 599 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 LPAR6P43657 344 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 UCP3P55916 312 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 RPS16P62249 146 aaKnown RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 CBX3Q13185 183 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 DIAPH2-AS1Q14236 149 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 RBMS2Q15434 407 aaKnown RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 HLA-DRB5Q30154 266 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 LY6G6FQ5SQ64 297 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 TPTE2P1Q5T6R2 138 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 ZNF660Q6AZW8 331 aaPredicted RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 TBC1D26Q86UD7 250 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 TGIF2LXQ8IUE1 241 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 CENPSQ8N2Z9 138 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 LINC00311Q8N616 119 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 ZBTB34Q8NCN2 500 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 BVESQ8NE79 360 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 C17orf50Q8WW18 174 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 RBMXL1Q96E39 390 aaKnown RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 TOLLIPQ9H0E2 274 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 NUDT15Q9NV35 164 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 VSIG4Q9Y279 399 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 PRELID3BQ9Y3B1 194 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 DSCAML1Q8TD84 2053 aa6.59□□□□□ -1.35
SMARCD3-215ENST00000496530 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 ZANQ9Y493 2812 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 A0A087X0M5 115 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 SAA2-SAA4A0A096LPE2 208 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 A0A1B0GX30 115 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 VGLL3A8MV65 326 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 ITGB1BP1O14713 200 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 FCGR3BO75015 233 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 SERPINE2P07093 398 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 SAA2P0DJI9 122 aaPredicted RBP6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 RPA2P15927 270 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 DYNLT3P51808 116 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 ZNF816Q0VGE8 651 aaPredicted RBP6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 LY6EQ16553 131 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 DMRTA1Q5VZB9 504 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 SHISA2Q6UWI4 295 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 KCTD9Q7L273 389 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 C16orf82Q7Z2V1 217 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 LHFPL1Q86WI0 220 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 ZNF439Q8NDP4 499 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 DUSP18Q8NEJ0 188 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 OR4C13Q8NGP0 309 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 RTN4IP1Q8WWV3 396 aaPredicted RBP6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 AGMATQ9BSE5 352 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 NPFFR1Q9GZQ6 430 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 RANBP3Q9H6Z4 567 aaPredicted RBP6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 C1RLQ9NZP8 487 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 GAB2Q9UQC2 676 aa6.58□□□□□ -1.36
SMARCD3-215ENST00000496530 MMP24Q9Y5R2 645 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms