RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 C12orf54Q6X4T0 127 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 MOB3AQ96BX8 217 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 SLC25A33Q9BSK2 321 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 INMT-MINDY4F8WBC2 141 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 TNFRSF13BO14836 293 aaPredicted RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 UPK1BO75841 260 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 SPDEFO95238 335 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 BCAP31P51572 246 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 GNB1P62873 340 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 CYCSP99999 105 aaKnown RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 OR4C16Q8NGL9 310 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 ABHD1Q96SE0 405 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 SDHAF2Q9NX18 166 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 PFDN2Q9UHV9 154 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 A0A1B0GW55 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 SCAF4O95104 1147 aaKnown RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L2P0CJ85 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L3P0CJ86 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L4P0CJ87 422 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L5P0CJ88 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L6P0CJ89 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L7P0CJ90 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 PET100P0DJ07 73 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 F2RP25116 425 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 GNMTQ14749 295 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 RNF144BQ7Z419 303 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 SIGLECL1Q8N7X8 197 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 OR56B4Q8NH76 319 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 LEAP2Q969E1 77 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 C1orf159Q96HA4 380 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 TBX15Q96SF7 602 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 DUX4Q9UBX2 424 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 A0A0A6YYD4 124 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF816Q0VGE8 651 aaPredicted RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 S100A7AQ86SG5 101 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 CIARTQ8N365 385 aaPredicted RBP7.05□□□□□ -1.28
U2AF1-212ENST00000496462 BVESQ8NE79 360 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 OR4X2Q8NGF9 303 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 SRRQ9GZT4 340 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 MIXL1Q9H2W2 232 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 CCL28Q9NRJ3 127 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 OR1A1Q9P1Q5 309 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 PRNDQ9UKY0 176 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 ATRQ13535 2644 aa7.05□□□□□ -1.28
U2AF1-212ENST00000496462 CENPVL3A0A0U1RRI6 287 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 CEBPZOSA8MTT3 80 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 INAFM1C9JVW0 142 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 CRLF1O75462 422 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 IGKV1D-33P01593 117 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 IGKV1-33P01594 117 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 LPAR6P43657 344 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 FOXL1Q12952 345 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 SLC25A24Q6NUK1 477 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 OVCH2Q7RTZ1 564 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 HSD17B13Q7Z5P4 300 aaPredicted RBP7.04□□□□□ -1.28
U2AF1-212ENST00000496462 SLC35E3Q7Z769 313 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 DRAM1Q8N682 238 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 OR1L6Q8NGR2 347 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 TINAGL1Q9GZM7 467 aaPredicted RBP7.04□□□□□ -1.28
U2AF1-212ENST00000496462 ARFGEF3Q5TH69 2177 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 GPR137BO60478 399 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 VDAC2P45880 294 aaPredicted RBP7.04□□□□□ -1.28
U2AF1-212ENST00000496462 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 OR2B11Q5JQS5 317 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF880Q6PDB4 577 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 GSG1LQ6UXU4 331 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 CENPVQ7Z7K6 275 aaPredicted RBP7.04□□□□□ -1.28
U2AF1-212ENST00000496462 LYPD6Q86Y78 171 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 FAM219AQ8IW50 185 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 MARCH1Q8TCQ1 289 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 A0A1W2PN81 502 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 TIMM23O14925 209 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 FGF2P09038 288 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 CHRNA7P36544 502 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 HOXA1P49639 335 aaPredicted RBP7.04□□□□□ -1.28
U2AF1-212ENST00000496462 TATDN3Q17R31 274 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 RUSC1-AS1Q66K80 236 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 NR2C2APQ86WQ0 139 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 GAPTQ8N292 157 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 MED28Q9H204 178 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 GAB2Q9UQC2 676 aa7.04□□□□□ -1.28
U2AF1-212ENST00000496462 ARPC1BO15143 372 aaKnown RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 TNFSF12O43508 249 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 PTHLHP12272 177 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 NAT1P18440 290 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 COMPP49747 757 aaPredicted RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM128Q5BJH2 165 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 FAM209BQ5JX69 171 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 IL17RELQ6ZVW7 336 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 DPF1Q92782 380 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 METTL1Q9UBP6 276 aaKnown RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 VPREB3Q9UKI3 123 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms