RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SULT4A1Q9BR01 284 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 LXNQ9BS40 222 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 NUDT9Q9BW91 350 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 TLNRD1Q9H1K6 362 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 NMNAT1Q9HAN9 279 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-212ENST00000496458 CACYBPQ9HB71 228 aaKnown RBP3.23□□□□□ -1.89
SF3B1-212ENST00000496458 RHOFQ9HBH0 211 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 C14orf105Q9NVL8 296 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 DDIT4Q9NX09 232 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 TAS2R13Q9NYV9 303 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 UBIAD1Q9Y5Z9 338 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 WDR87Q6ZQQ6 2873 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 ALPK3Q96L96 1907 aa3.23□□□□□ -1.89
SF3B1-212ENST00000496458 RBBP6Q7Z6E9 1792 aaKnown RBP3.23□□□□□ -1.89
SF3B1-212ENST00000496458 CHD7Q9P2D1 2997 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 IGLV4-60A0A075B6I1 120 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 A0A096LNJ9 63 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 TRAV8-4A0A0B4J246 113 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 D6RAR5 112 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 F5H5K5 113 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 TAAR5O14804 337 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CHST10O43529 356 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 ENTPD6O75354 484 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SERPINA1P01009 418 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 PTHP01270 115 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 IFNA17P01571 189 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 P01737 135 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 GIPP09681 153 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR5H8P0DN80 308 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CRHBPP24387 322 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 GRPRP30550 384 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 BTCP35070 178 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 POLR2IP36954 125 aaKnown RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 VDAC2P45880 294 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SNRPD2P62316 118 aaKnown RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 FAM3AP98173 230 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 HLA-DRB5Q30154 266 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 N4BP2L1Q5TBK1 243 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 FBXW9Q5XUX1 488 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 HAGHLQ6PII5 290 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CYHR1Q6ZMK1 362 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 H2AFVQ71UI9 128 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 C10orf107Q8IVU9 208 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SAXO1Q8IYX7 474 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SVBPQ8N300 66 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 PXT1Q8NFP0 134 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR52E4Q8NGH9 312 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR8D4Q8NGM9 314 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR2T4Q8NH00 348 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR5J2Q8NH18 312 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 NT5CQ8TCD5 201 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 TM4SF18Q96CE8 201 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 DDIT4LQ96D03 193 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 ERMAPQ96PL5 475 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 EXOSC4Q9NPD3 245 aaKnown RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 RBM22Q9NW64 420 aaKnown RBP eCLIP3.22□□□□□ -1.89
SF3B1-212ENST00000496458 COMMD9Q9P000 198 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CLCF1Q9UBD9 225 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 CD84Q9UIB8 345 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 VAX2Q9UIW0 290 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 ANXA10Q9UJ72 324 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 OR52A1Q9UKL2 312 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 RAB22AQ9UL26 194 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SIGLEC9Q9Y336 463 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 ARL5AQ9Y689 179 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 TANC1Q9C0D5 1861 aa3.22□□□□□ -1.89
SF3B1-212ENST00000496458 SCN10AQ9Y5Y9 1956 aa3.21□□□□□ -1.89
SF3B1-212ENST00000496458 LOXHD1Q8IVV2 1947 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 A0A087X0T9 212 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CEACAM18A8MTB9 384 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 EFCAB9A8MZ26 197 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 H7C417 338 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ARPC5O15511 151 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ORC5O43913 435 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 TPST1O60507 370 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 TNFSF13O75888 250 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ATG12O94817 140 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 CRYBA1P05813 215 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 NBEAP1P0C6P0 100 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF823P16415 610 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF25P17030 456 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 NELFEP18615 380 aaKnown RBP3.21□□□□□ -1.9
SF3B1-212ENST00000496458 FMO3P31513 532 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 IFNGR2P38484 337 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 MAGEA12P43365 314 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 MTPNP58546 118 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 IL5RAQ01344 420 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 BAXQ07812 192 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 FZD2Q14332 565 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF266Q14584 549 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 OR1Q1Q15612 314 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 OR8G1Q15617 311 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM236Q5W0B7 351 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 PLET1Q6UQ28 207 aa3.21□□□□□ -1.9
SF3B1-212ENST00000496458 FAM131AQ6UXB0 335 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms