RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
HDAC4-213ENST00000496347 METTL1Q9UBP6 276 aaKnown RBP12.25□□□□□ -0.45
HDAC4-213ENST00000496347 DAPK2Q9UIK4 370 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 PITPNAQ00169 270 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 TMEM267Q0VDI3 215 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-213ENST00000496347 CBX3Q13185 183 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 PSG5Q15238 335 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 HACD4Q5VWC8 232 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 ZNF562Q6V9R5 426 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 ZNF491Q8N8L2 437 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 LGALS14Q8TCE9 139 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 MAFIPQ8WZ33 124 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
HDAC4-213ENST00000496347 KLK15Q9H2R5 256 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 SLC35D1Q9NTN3 355 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 SDHAF2Q9NX18 166 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-213ENST00000496347 ETV7Q9Y603 341 aa12.24□□□□□ -0.45
HDAC4-213ENST00000496347 TNCP24821 2201 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 A0A1W2PN81 502 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 I3L521 148 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 CA2P00918 260 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 OR8U9P0C7N5 309 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 CHRNA7P36544 502 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 RAB9AP51151 201 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 ZNF616Q08AN1 781 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-213ENST00000496347 RTL8BQ17RB0 113 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 H1FOOQ8IZA3 346 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-213ENST00000496347 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 ADTRPQ96IZ2 230 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 HARBI1Q96MB7 349 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 OR51E2Q9H255 320 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 DCSTAMPQ9H295 470 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 RHBDL2Q9NX52 303 aa12.23□□□□□ -0.45
HDAC4-213ENST00000496347 RRP15Q9Y3B9 282 aaKnown RBP12.23□□□□□ -0.45
HDAC4-213ENST00000496347 WI2-2373I1.2A0A1W2PRP0 233 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 SLC25A17O43808 307 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 SOX15O60248 233 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 RAMP3O60896 148 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 TMEM127O75204 238 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 RRASP10301 218 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 SDC2P34741 201 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 LGALS7P47929 136 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 LUMP51884 338 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-213ENST00000496347 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
HDAC4-213ENST00000496347 DGCR2P98153 550 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 NEDD8Q15843 81 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 ACTBL2Q562R1 376 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 PPP1R27Q86WC6 154 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 RBM7Q9Y580 266 aaKnown RBP12.22□□□□□ -0.45
HDAC4-213ENST00000496347 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 A3GALT2U3KPV4 340 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 SORL1Q92673 2214 aa12.22□□□□□ -0.45
HDAC4-213ENST00000496347 IGKV1D-8A0A087WSZ0 117 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 TMEM235A6NFC5 223 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 SEC14L6B5MCN3 397 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 FCN1O00602 326 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
HDAC4-213ENST00000496347 CTXN2P0C2S0 81 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 EGR2P11161 476 aaPredicted RBP12.21□□□□□ -0.45
HDAC4-213ENST00000496347 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.45
HDAC4-213ENST00000496347 CD40LGP29965 261 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 GNG2P59768 71 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 GNB1P62873 340 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 TIMM50Q3ZCQ8 353 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 CDNFQ49AH0 187 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 UNQ5815/PRO19632Q6UWF5 114 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 NUDCD2Q8WVJ2 157 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 TPSG1Q9NRR2 321 aa12.21□□□□□ -0.45
HDAC4-213ENST00000496347 A0A0A6YYH2 397 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 A6NJ64 397 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 H3BUA1 57 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 CD36P16671 472 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 INSL3P51460 131 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 LINC00205P59089 165 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 TMEM177Q53S58 311 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 ASPHD1Q5U4P2 390 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 DDB2Q92466 427 aa12.2□□□□□ -0.46
HDAC4-213ENST00000496347 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
HDAC4-213ENST00000496347 ELF5Q9UKW6 265 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-213ENST00000496347 SHOXO15266 292 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 SLC22A5O76082 557 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
HDAC4-213ENST00000496347 MXD1Q05195 221 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 FXYD3Q14802 87 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 ZNF260Q3ZCT1 412 aa12.19□□□□□ -0.46
HDAC4-213ENST00000496347 ZNF645Q8N7E2 425 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms