RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 OXLD1Q5BKU9 147 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 LIN54Q6MZP7 749 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 CNIH2Q6PI25 160 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 BVESQ8NE79 360 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 COMMD3Q9UBI1 195 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 METTL1Q9UBP6 276 aaKnown RBP13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 A3GALT2U3KPV4 340 aa13.76□□□□□ -0.21
RHBDD3-207ENST00000496342 A0A0A6YYH2 397 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 A6NJ64 397 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 NUDT19A8MXV4 375 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 XRCC3O43542 346 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 SLC25A17O43808 307 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 PF4P02776 101 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 IGF1P05019 195 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 ALDH3B2P48448 385 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 HOGA1Q86XE5 327 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 PDPNQ86YL7 162 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 GPHA2Q96T91 129 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 OR2W1Q9Y3N9 320 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 MEGF8Q7Z7M0 2845 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 NOTCH1P46531 2555 aa13.75□□□□□ -0.21
RHBDD3-207ENST00000496342 RBBP9O75884 186 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 CA2P00918 260 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 PRB2P02812 416 aaPredicted RBP13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 DUTP33316 252 aaKnown RBP13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 ARPC4P59998 168 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 CX3CL1P78423 397 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 OR2B11Q5JQS5 317 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 TMEM69Q5SWH9 247 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 ABHD5Q8WTS1 349 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 CASTOR1Q8WTX7 329 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 DDB2Q92466 427 aa13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 S100A16Q96FQ6 103 aaKnown RBP13.74□□□□□ -0.21
RHBDD3-207ENST00000496342 NOTCH3Q9UM47 2321 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 HPGDSO60760 199 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 TMEM127O75204 238 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 HLA-DQB1P01920 261 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 CTXN2P0C2S0 81 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 IGLL1P15814 213 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 CD33P20138 364 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 AADACP22760 399 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 THBS3P49746 956 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 RPL30P62888 115 aaKnown RBP13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 CXorf66Q5JRM2 361 aaPredicted RBP13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 GPR141Q7Z602 305 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 COMMD1Q8N668 190 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 FLYWCH2Q96CP2 140 aaKnown RBP13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 HARBI1Q96MB7 349 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 KLK15Q9H2R5 256 aa13.73□□□□□ -0.21
RHBDD3-207ENST00000496342 TNCP24821 2201 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 TRAV41A0A0B4J266 112 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 SRRM4A7MD48 611 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 ARPC1BO15143 372 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 SOX15O60248 233 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 TUSC2O75896 110 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 IGHG4P01861 327 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 EGR2P11161 476 aaPredicted RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 FCGR2CP31995 323 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 SSBP2P81877 361 aaPredicted RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 PJVKQ0ZLH3 352 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 FOXE3Q13461 319 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 IFT46Q9NQC8 304 aa13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 RBMX2Q9Y388 322 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-207ENST00000496342 A0A1W2PN81 502 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 SPDEFO95238 335 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 CRYZL1O95825 349 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 ELANEP08246 267 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 ELK1P19419 428 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 PSMB8P28062 276 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 CHRNA7P36544 502 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 FXYD4P59646 89 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 SPCS2Q15005 226 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 C19orf54Q5BKX5 351 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 ZNF695Q8IW36 515 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 RNF5Q99942 180 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 GON7Q9BXV9 100 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 MRPS7Q9Y2R9 242 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-207ENST00000496342 SHOXO15266 292 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 TNFSF12O43508 249 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 FCGR3BO75015 233 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms