RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ETV3LQ6ZN32 361 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 LCNL1Q6ZST4 164 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 C18orf65Q6ZTR6 163 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 FLYWCH2Q96CP2 140 aaKnown RBP16.17■□□□□ 0.18
COL9A2-211ENST00000496215 C5orf30Q96GV9 206 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 FUNDC2Q9BWH2 189 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 ANXA10Q9UJ72 324 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 WSB1Q9Y6I7 421 aa16.17■□□□□ 0.18
COL9A2-211ENST00000496215 THBS3P49746 956 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 RPS16P62249 146 aaKnown RBP16.16■□□□□ 0.18
COL9A2-211ENST00000496215 NDPQ00604 133 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 PSG5Q15238 335 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 UBE2NLQ5JXB2 153 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 CNIH2Q6PI25 160 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 LINC00482Q8N8I6 264 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 WFDC9Q8NEX5 89 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 OR13F1Q8NGS4 319 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 ABHD5Q8WTS1 349 aa16.16■□□□□ 0.18
COL9A2-211ENST00000496215 G3V318 75 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 IGLL1P15814 213 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 NFYAP23511 347 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-211ENST00000496215 PSMB8P28062 276 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 ARPC4P59998 168 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 CX3CL1P78423 397 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 TAGLNQ01995 201 aaKnown RBP16.15■□□□□ 0.18
COL9A2-211ENST00000496215 RTL8BQ17RB0 113 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 ECSCRQ19T08 205 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 ZNF660Q6AZW8 331 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-211ENST00000496215 RCC1LQ96I51 464 aaKnown RBP16.15■□□□□ 0.18
COL9A2-211ENST00000496215 ADTRPQ96IZ2 230 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 AUNIPQ9H7T9 357 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 OR2W1Q9Y3N9 320 aa16.15■□□□□ 0.18
COL9A2-211ENST00000496215 SLC25A17O43808 307 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 PRB2P02812 416 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-211ENST00000496215 SMIM18P0DKX4 95 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 LUMP51884 338 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-211ENST00000496215 NCS1P62166 190 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
COL9A2-211ENST00000496215 ZNF645Q8N7E2 425 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 SAMD12Q8N8I0 201 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 BEST4Q8NFU0 473 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 SLC25A46Q96AG3 418 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 HARBI1Q96MB7 349 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 CLCC1Q96S66 551 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 FBXO7Q9Y3I1 522 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 A3GALT2U3KPV4 340 aa16.14■□□□□ 0.17
COL9A2-211ENST00000496215 J3QRK9 145 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 DUS4LO95620 317 aaKnown RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 CA2P00918 260 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 RRASP10301 218 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 PPIFP30405 207 aaKnown RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 MYCNOSP40205 109 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 CDX1P47902 265 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 CRIP2P52943 208 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 TMEM65Q6PI78 240 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 BVESQ8NE79 360 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 KCTD12Q96CX2 325 aaKnown RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 S100A16Q96FQ6 103 aaKnown RBP16.13■□□□□ 0.17
COL9A2-211ENST00000496215 TPSG1Q9NRR2 321 aa16.13■□□□□ 0.17
COL9A2-211ENST00000496215 FCN1O00602 326 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 XRCC3O43542 346 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 IGLV1-40P01703 118 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 HLA-DQB1P01920 261 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 DUTP33316 252 aaKnown RBP16.12■□□□□ 0.17
COL9A2-211ENST00000496215 CBX5P45973 191 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 VBP1P61758 197 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 TMEM69Q5SWH9 247 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 HOGA1Q86XE5 327 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 GVQW1Q8N7I0 195 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 TCTEX1D1Q8N7M0 179 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 C4orf3Q8WVX3 66 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 RAX2Q96IS3 184 aa16.12■□□□□ 0.17
COL9A2-211ENST00000496215 A0A1W2PN81 502 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 SHOXO15266 292 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 SLC22A5O76082 557 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 CHRNA7P36544 502 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 LGALS7P47929 136 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 DEFB136Q30KP8 78 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 TMEM177Q53S58 311 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 C19orf54Q5BKX5 351 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 KCTD9Q7L273 389 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 MINDY2Q8NBR6 621 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 MYOZ3Q8TDC0 251 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 DDB2Q92466 427 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 ARPC1AQ92747 370 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 DUX3Q96PT4 197 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 P2RX4Q99571 388 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 NECAP2Q9NVZ3 263 aa16.11■□□□□ 0.17
COL9A2-211ENST00000496215 FOXA2Q9Y261 457 aaPredicted RBP16.11■□□□□ 0.17
COL9A2-211ENST00000496215 IGKV1D-13A0A0B4J2D9 117 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 LINC00473A8K010 186 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 CCL24O00175 119 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 IGLV2-23P01705 113 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 IGKV1-13P0DP09 117 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 PTHLHP12272 177 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 RAB25P57735 213 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 TAS2R20P59543 309 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 TMEM267Q0VDI3 215 aaPredicted RBP16.1■□□□□ 0.17
COL9A2-211ENST00000496215 ZNF562Q6V9R5 426 aa16.1■□□□□ 0.17
COL9A2-211ENST00000496215 REC114Q7Z4M0 266 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms