RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 FAM172BPA6NC97 362 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ACOD1A6NK06 481 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 C15orf61A6NNL5 157 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 PRR23D1E9PI22 279 aaPredicted RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 LOC110117498-PIK3R3F6TDL0 507 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 H3BN98 237 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 LY6LH3BQJ8 138 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 DLGAP1O14490 977 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 MAGEB4O15481 346 aaPredicted RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 TNFSF12O43508 249 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 PRKYO43930 277 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ENTPD6O75354 484 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 DUS4LO95620 317 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 HAND1O96004 215 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 NRASP01111 189 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 PRR23D2P0DMB1 279 aaPredicted RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 CD24P25063 80 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 THBS3P49746 956 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 HCCSP53701 268 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 EDDM3BP56851 147 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 RPL23AP62750 156 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 RPS27AP62979 156 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 CDK5Q00535 292 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 MS4A2Q01362 244 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 EWSR1Q01844 656 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS52-222ENST00000495981 BDH1Q02338 343 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 EMX1Q04741 257 aaPredicted RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 MEF2CQ06413 473 aaPredicted RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 RIPPLY1Q0D2K3 151 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 BNIP1Q12981 228 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 APOFQ13790 326 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 GK3PQ14409 553 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 NDUFA5Q16718 116 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ABCA11PQ4W5N1 156 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 CLVS2Q5SYC1 327 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 TPTE2P1Q5T6R2 138 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 BCL2L15Q5TBC7 163 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ANGPTL5Q86XS5 388 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 SLC38A6Q8IZM9 456 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 DEFB107AQ8IZN7 70 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 TPRX1Q8N7U7 411 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 C5orf56Q8N8D9 126 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ASCC1Q8N9N2 400 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 OR4X2Q8NGF9 303 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 OR13D1Q8NGV5 346 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 CCDC124Q96CT7 223 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 PELI1Q96FA3 418 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 CEP19Q96LK0 163 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 RCHY1Q96PM5 261 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 CNN2Q99439 309 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 YIPF3Q9GZM5 350 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 CHST6Q9GZX3 395 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 TMEM133Q9H2Q1 129 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ZNF286AQ9HBT8 521 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 ABCB10Q9NRK6 738 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 RBFOX1Q9NWB1 397 aaKnown RBP3.26□□□□□ -1.89
VPS52-222ENST00000495981 MTCH1Q9NZJ7 389 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 HHLA2Q9UM44 414 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 R4GMQ9 66 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 MUC4Q99102 2169 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 IGKV1-9A0A0C4DH69 117 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 IGKV1-12A0A0C4DH73 117 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 LOC107986453A0A1B0GWG9 222 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 A6NIN4 97 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 E9PQ18 207 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 NXPH4O95158 308 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 IGKV1D-12P01611 117 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 CSN2P05814 226 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ANXA3P12429 323 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 BCL3P20749 454 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 HTR1DP28221 377 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 KIR3DL2P43630 455 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 NPBWR2P48146 333 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 POU3F4P49335 361 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 RIDAP52758 137 aaKnown RBP3.25□□□□□ -1.89
VPS52-222ENST00000495981 PAX9P55771 341 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 OR12D2P58182 307 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 SEC61GP60059 68 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ZNF85Q03923 595 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 GINS1Q14691 196 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ZNF146Q15072 292 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 UBE2V2Q15819 145 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 HLA-DRB5Q30154 266 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 AADACL4Q5VUY2 407 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 TMEM236Q5W0B7 351 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 FAHD1Q6P587 224 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 SPSB3Q6PJ21 355 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 SLC25A26Q70HW3 274 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 GDPD3Q7L5L3 318 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 HOGA1Q86XE5 327 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 SBSPONQ8IVN8 264 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 SLC35F2Q8IXU6 374 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ZNF676Q8N7Q3 588 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 OR2T27Q8NH04 317 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 OR56B4Q8NH76 319 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 NDNFQ8TB73 568 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms