RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 YIF1BQ5BJH7 314 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 FAM223AQ8IWN6 122 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 JAGN1Q8N5M9 183 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
COL1A1-209ENST00000495677 UQCC2Q9BRT2 126 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 AMBNQ9NP70 447 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 COA4Q9NYJ1 87 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 ZNF230Q9UIE0 474 aaPredicted RBP10.04□□□□□ -0.8
COL1A1-209ENST00000495677 RPL36Q9Y3U8 105 aaKnown RBP10.04□□□□□ -0.8
COL1A1-209ENST00000495677 ORC6Q9Y5N6 252 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 DMRT1Q9Y5R6 373 aa10.04□□□□□ -0.8
COL1A1-209ENST00000495677 TRBV5-7A0A0A0MS05 114 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 TRBV6-6A0A0A6YYG2 114 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 MSGN1A6NI15 193 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 APOA2P02652 100 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 OR9G9P0C7N8 305 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 ZBTB25P24278 435 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 CEACAM6P40199 344 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 LINC00205P59089 165 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 DEFA5Q01523 94 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 ANKRD55Q3KP44 614 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 MOB1BQ7L9L4 216 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 DRAXINQ8NBI3 349 aaPredicted RBP10.03□□□□□ -0.8
COL1A1-209ENST00000495677 NEDD4LQ96PU5 975 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 RIMS4Q9H426 269 aaPredicted RBP10.03□□□□□ -0.8
COL1A1-209ENST00000495677 AKIP1Q9NQ31 210 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 BABAM2Q9NXR7 383 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
COL1A1-209ENST00000495677 UBE2CO00762 179 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 SPRY2O43597 315 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 CBLN1P23435 193 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 MAP2K4P45985 399 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 TAGLNQ01995 201 aaKnown RBP10.02□□□□□ -0.81
COL1A1-209ENST00000495677 TMPRSS11AQ6ZMR5 421 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 GPHB5Q86YW7 130 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 TMEM217Q8N7C4 229 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.02□□□□□ -0.81
COL1A1-209ENST00000495677 OR13C5Q8NGS8 318 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 KCNG3Q8TAE7 436 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 SLC35D1Q9NTN3 355 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 ZNF221Q9UK13 617 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 MGAT4AQ9UM21 535 aa10.02□□□□□ -0.81
COL1A1-209ENST00000495677 SAC3D1A6NKF1 404 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 GGCTO75223 188 aaKnown RBP10.01□□□□□ -0.81
COL1A1-209ENST00000495677 DCKP27707 260 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 ETV1P50549 477 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 RHOGP84095 191 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 ATP5G2Q06055 141 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 EXOSC2Q13868 293 aaKnown RBP10.01□□□□□ -0.81
COL1A1-209ENST00000495677 ZIK1Q3SY52 487 aaPredicted RBP10.01□□□□□ -0.81
COL1A1-209ENST00000495677 TMEM177Q53S58 311 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 OR2G6Q5TZ20 316 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 ZNF57Q68EA5 555 aaPredicted RBP10.01□□□□□ -0.81
COL1A1-209ENST00000495677 C6orf201Q7Z4U5 140 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 NKAIN3Q8N8D7 197 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 OR52B4Q8NGK2 314 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
COL1A1-209ENST00000495677 THRSPQ92748 146 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 PGLYRP3Q96LB9 341 aa10.01□□□□□ -0.81
COL1A1-209ENST00000495677 TRAV25A0A0B4J276 109 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
COL1A1-209ENST00000495677 TUSC2O75896 110 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 LALBAP00709 142 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 UBBP0CG47 229 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 EDN2P20800 178 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 APOC4P55056 127 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 TCTAP57738 103 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 ZNF45Q02386 682 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 GLT8D1Q68CQ7 371 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 TMEM61Q8N0U2 210 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 TEX45Q8NA69 505 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 NECAP1Q8NC96 275 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 PHB2Q99623 299 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 SLC29A1Q99808 456 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 TM2D1Q9BX74 207 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 OR1A1Q9P1Q5 309 aa10□□□□□ -0.81
COL1A1-209ENST00000495677 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 EI24O14681 340 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 RASSF2P50749 326 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 RPS27AP62979 156 aaKnown RBP9.99□□□□□ -0.81
COL1A1-209ENST00000495677 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 SRSF12Q8WXF0 261 aaKnown RBP9.99□□□□□ -0.81
COL1A1-209ENST00000495677 RNF183Q96D59 192 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 HARBI1Q96MB7 349 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 EXOSC1Q9Y3B2 195 aaKnown RBP9.99□□□□□ -0.81
COL1A1-209ENST00000495677 DNAH6Q9C0G6 4158 aa9.99□□□□□ -0.81
COL1A1-209ENST00000495677 A8MWP6 167 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 CIB2O75838 187 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 OR2C1O95371 312 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 RRASP10301 218 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 HTR2CP28335 458 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 HLA-DRB3P79483 266 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 TM4SF20Q53R12 229 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 ZNF485Q8NCK3 441 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms