RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 TSNAXQ99598 290 aaKnown RBP12.58□□□□□ -0.4
LIME1-209ENST00000494776 HSPB9Q9BQS6 159 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 SCOCQ9UIL1 159 aa12.58□□□□□ -0.4
LIME1-209ENST00000494776 TSSC4Q9Y5U2 329 aaPredicted RBP12.58□□□□□ -0.4
LIME1-209ENST00000494776 TUSC2O75896 110 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 NDUFA3O95167 84 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 HLA-DRB1P01911 266 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 HLA-DQB1P01920 261 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 IGKV1-16P04430 117 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 VDAC1P21796 283 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 FCGR2CP31995 323 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 TMBIM6P55061 237 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 SNX29P2Q8IUI4 249 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 OR4F17Q8NGA8 305 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 ADTRPQ96IZ2 230 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 OR4F4Q96R69 305 aa12.57□□□□□ -0.4
LIME1-209ENST00000494776 METTL1Q9UBP6 276 aaKnown RBP12.57□□□□□ -0.4
LIME1-209ENST00000494776 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 RRASP10301 218 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 SPCS2Q15005 226 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 CDK10Q15131 360 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 BVESQ8NE79 360 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 OR5AP2Q8NGF4 316 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 C5orf30Q96GV9 206 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 BCL7BQ9BQE9 202 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
LIME1-209ENST00000494776 IGKV1D-13A0A0B4J2D9 117 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 RGS5O15539 181 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 IGKV1-13P0DP09 117 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 PF4V1P10720 104 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 AADACP22760 399 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 DUTP33316 252 aaKnown RBP12.55□□□□□ -0.4
LIME1-209ENST00000494776 PSG5Q15238 335 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 EHFQ9NZC4 300 aa12.55□□□□□ -0.4
LIME1-209ENST00000494776 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 ADARB2-AS1A8MUL3 147 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 SHOXO15266 292 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 ATP6V0E1O15342 81 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 SPDEFO95238 335 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 PMP2P02689 132 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 IGF1P05019 195 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 LGALS7P47929 136 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 TAS2R46P59540 309 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 FXYD4P59646 89 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 OR5H2Q8NGV7 314 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 DCUN1D5Q9BTE7 237 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 EXTL2Q9UBQ6 330 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 ADAM30Q9UKF2 790 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 RBMX2Q9Y388 322 aaKnown RBP12.54□□□□□ -0.4
LIME1-209ENST00000494776 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 WSB1Q9Y6I7 421 aa12.54□□□□□ -0.4
LIME1-209ENST00000494776 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 LINC00473A8K010 186 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 SLC25A17O43808 307 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 CRYZL1O95825 349 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 PPYP01298 95 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 RFX2P48378 723 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 HERV-K104P61576 105 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 CXorf66Q5JRM2 361 aaPredicted RBP12.53□□□□□ -0.4
LIME1-209ENST00000494776 ZNF660Q6AZW8 331 aaPredicted RBP12.53□□□□□ -0.4
LIME1-209ENST00000494776 KCTD9Q7L273 389 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 GPX8Q8TED1 209 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 GIMAP1Q8WWP7 306 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
LIME1-209ENST00000494776 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 ZFP57Q9NU63 452 aa12.53□□□□□ -0.4
LIME1-209ENST00000494776 TRAV41A0A0B4J266 112 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 SULT1C2O00338 296 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 FCN1O00602 326 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 FCGR3BO75015 233 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 PF4P02776 101 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 HLA-DMAP28067 261 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 RPL23AP62750 156 aaKnown RBP12.52□□□□□ -0.41
LIME1-209ENST00000494776 CX3CL1P78423 397 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 ECSCRQ19T08 205 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 TMEM177Q53S58 311 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 RNASE12Q5GAN4 147 aaKnown RBP12.52□□□□□ -0.41
LIME1-209ENST00000494776 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 TMEM17Q86X19 198 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 DDB2Q92466 427 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 ISOC1Q96CN7 298 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.41
LIME1-209ENST00000494776 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms