RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TSNAXQ99598 290 aaKnown RBP12.14□□□□□ -0.47
LIMS2-216ENST00000494613 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 RNF167Q9H6Y7 350 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 GNB4Q9HAV0 340 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
LIMS2-216ENST00000494613 VSIG4Q9Y279 399 aa12.14□□□□□ -0.47
LIMS2-216ENST00000494613 RRP15Q9Y3B9 282 aaKnown RBP12.14□□□□□ -0.47
LIMS2-216ENST00000494613 SOX15O60248 233 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 DIRAS3O95661 229 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 ARL6IP1Q15041 203 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 DPF1Q92782 380 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 OR5B12Q96R08 314 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 OR2D2Q9H210 308 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.13□□□□□ -0.47
LIMS2-216ENST00000494613 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
LIMS2-216ENST00000494613 A3GALT2U3KPV4 340 aa12.13□□□□□ -0.47
LIMS2-216ENST00000494613 A0A1W2PN81 502 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 APOA2P02652 100 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 DTYMKP23919 212 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 CHRNA7P36544 502 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 LGALS7P47929 136 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 RUNX1Q01196 453 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 MXD1Q05195 221 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 HACD4Q5VWC8 232 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
LIMS2-216ENST00000494613 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
LIMS2-216ENST00000494613 SLC25A17O43808 307 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 CRYGBP07316 175 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 CD36P16671 472 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 GNB1P62873 340 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 FHL3Q13643 280 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 FXYD3Q14802 87 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 SFXN4Q6P4A7 337 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 H1FOOQ8IZA3 346 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-216ENST00000494613 BVESQ8NE79 360 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
LIMS2-216ENST00000494613 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
LIMS2-216ENST00000494613 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-216ENST00000494613 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
LIMS2-216ENST00000494613 J3QRK9 145 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 ARPC1BO15143 372 aaKnown RBP12.1□□□□□ -0.47
LIMS2-216ENST00000494613 SPDEFO95238 335 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 CA2P00918 260 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 LUMP51884 338 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-216ENST00000494613 DGCR2P98153 550 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 PITPNAQ00169 270 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
LIMS2-216ENST00000494613 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 NEDD8Q15843 81 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 TCTEX1D1Q8N7M0 179 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-216ENST00000494613 TPSG1Q9NRR2 321 aa12.1□□□□□ -0.47
LIMS2-216ENST00000494613 DNAH3Q8TD57 4116 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 RAMP3O60896 148 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 KCTD21Q4G0X4 260 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 TMEM177Q53S58 311 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 IDNKQ5T6J7 187 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 OR5H6Q8NGV6 325 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 LGALS14Q8TCE9 139 aa12.09□□□□□ -0.47
LIMS2-216ENST00000494613 LINC00473A8K010 186 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 SHOXO15266 292 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 SSX5O60225 188 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 SCGNO76038 276 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 CNIH1O95406 144 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 RRASP10301 218 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-216ENST00000494613 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
LIMS2-216ENST00000494613 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-216ENST00000494613 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 OR5T1Q8NG75 326 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
LIMS2-216ENST00000494613 DDB2Q92466 427 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms