RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ST6GAL2Q96JF0 529 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 OPALINQ96PE5 141 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 RASL11BQ9BPW5 248 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 HSPB9Q9BQS6 159 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 GON7Q9BXV9 100 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 BARHL1Q9BZE3 327 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 COMMD4Q9H0A8 199 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 ABCG5Q9H222 651 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF581Q9P0T4 197 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 WARS2Q9UGM6 360 aaKnown RBP3.97□□□□□ -1.77
PTCD3-219ENST00000494323 AMMECR1Q9Y4X0 333 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-219ENST00000494323 WSB1Q9Y6I7 421 aa3.97□□□□□ -1.77
PTCD3-219ENST00000494323 IGHV3-43A0A0B4J1X8 118 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 A0A0B4J203 849 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 G3V2T6 193 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 G3V318 75 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 J3QLW9 94 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 BMPR1BO00238 502 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 HSD17B6O14756 317 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 MPZL2O60487 215 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 SAP30O75446 220 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 CSN2P05814 226 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 HCKP08631 526 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 UBCP0CG48 685 aaKnown RBP3.96□□□□□ -1.78
PTCD3-219ENST00000494323 IGHV3-43DP0DP04 118 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 SLC2A2P11168 524 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-219ENST00000494323 SPNP16150 400 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF19P17023 458 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 CALB2P22676 271 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 DUTP33316 252 aaKnown RBP3.96□□□□□ -1.78
PTCD3-219ENST00000494323 ARL16Q0P5N6 197 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 KIAA0141Q14154 515 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-219ENST00000494323 FLOT2Q14254 428 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 KISS1Q15726 138 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 ZSCAN26Q16670 478 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 PIGYQ3MUY2 71 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 FAM27D1Q5T7N8 215 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 C12orf73Q69YU5 71 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 GPR141Q7Z602 305 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 TGIF2LXQ8IUE1 241 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 GID4Q8IVV7 300 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 Q8N6K4 173 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 CHST4Q8NCG5 386 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 CCDC54Q8NEL0 328 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 OR13C3Q8NGS6 347 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 C4orf3Q8WVX3 66 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 DCUN1D4Q92564 292 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 C10orf35Q96D05 121 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 NRBF2Q96F24 287 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 KCTD7Q96MP8 289 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 S1PR3Q99500 378 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 PRRG3Q9BZD7 231 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 ALX4Q9H161 411 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-219ENST00000494323 GNB4Q9HAV0 340 aa3.96□□□□□ -1.78
PTCD3-219ENST00000494323 TCRBV3S1A0A5B6 114 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 DAPL1A0PJW8 107 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 C5orf51A6NDU8 294 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 TRIM64CA6NLI5 447 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 I3L521 148 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SDCBPO00560 298 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SLC31A2O15432 143 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 CDRT1O95170 752 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 MOSP00540 346 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 IGHG4P01861 327 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ISG15P05161 165 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 HTR1AP08908 422 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 GZMHP20718 246 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 VDAC1P21796 283 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 PSMB8P28062 276 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 CD1BP29016 333 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SOX6P35712 828 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 NPBWR1P48145 328 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 RAB9AP51151 201 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 INSL3P51460 131 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 GNB1P62873 340 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF816Q0VGE8 651 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-219ENST00000494323 RSU1Q15404 277 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF691Q5VV52 312 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 RSBN1Q5VWQ0 802 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-219ENST00000494323 LPCAT4Q643R3 524 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 KDM4DQ6B0I6 523 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 FAM220AQ7Z4H9 259 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 C5orf24Q7Z6I8 188 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 LHFPL3Q86UP9 236 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF429Q86V71 674 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SERPINA12Q8IW75 414 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SAXO1Q8IYX7 474 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 SUMF2Q8NBJ7 301 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 TMEM104Q8NE00 496 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 OR5D14Q8NGL3 314 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 CASTOR1Q8WTX7 329 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 RTN4IP1Q8WWV3 396 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-219ENST00000494323 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 DLX4Q92988 240 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ARL11Q969Q4 196 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 MBOAT4Q96T53 435 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 GPER1Q99527 375 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms