RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DOK5Q9P104 306 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 OR1A1Q9P1Q5 309 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 IL36RNQ9UBH0 155 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 JPT1Q9UK76 154 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 PPP1R3CQ9UQK1 317 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 ARID1AO14497 2285 aa9.67□□□□□ -0.86
RFC4-214ENST00000494047 TLN1Q9Y490 2541 aaKnown RBP9.67□□□□□ -0.86
RFC4-214ENST00000494047 SMG1Q96Q15 3661 aaKnown RBP9.67□□□□□ -0.86
RFC4-214ENST00000494047 A0A0G2JRQ6 117 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 UBE2L5PA0A1B0GUS4 154 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 A0A1B0GV50 99 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 A0A1B0GWJ7 208 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ZNF503-AS2A6NEH8 195 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 OR5H1A6NKK0 313 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ZNF729A6NN14 1252 aaPredicted RBP9.66□□□□□ -0.86
RFC4-214ENST00000494047 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 IGKV1-39P01597 117 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 IGKV3-15P01624 115 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 IGHV2-70P01814 119 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 CCL2P13500 99 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 DAOP14920 347 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 GZMHP20718 246 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ASCL1P50553 236 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 C3orf36Q3SXR2 165 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ZNF585BQ52M93 769 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 PDLIM3Q53GG5 364 aaPredicted RBP9.66□□□□□ -0.86
RFC4-214ENST00000494047 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
RFC4-214ENST00000494047 FAM214BQ7L5A3 538 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 DTD1Q8TEA8 209 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 OR4C12Q96R67 309 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 PYGO2Q9BRQ0 406 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 OR2D2Q9H210 308 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 MIOXQ9UGB7 285 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ARL2-SNX15V9GYD0 113 aa9.66□□□□□ -0.86
RFC4-214ENST00000494047 ATMQ13315 3056 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 TRAV9-1A0A075B6T8 112 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 FNDC10F2Z333 226 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 H3BP45 60 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 H7BYZ3 331 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BKO60814 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 MT-CO2P00403 227 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BJP06899 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 CELA3AP09093 270 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 IAPPP10997 89 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF16P17020 682 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BOP23527 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 GCH1P30793 250 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BBP33778 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 RAB7AP51149 207 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BDP58876 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ERVK-16P61578 105 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 EIF4EBP1Q13541 118 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 LY6DQ14210 128 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 DEFB109BQ30KR1 87 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF718Q3SXZ3 478 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 MBNL2Q5VZF2 373 aaKnown RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 LINC00696Q6ZRV3 163 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF843Q8N446 348 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 OR5R1Q8NH85 324 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 CORO2AQ92828 525 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 RSG1Q9BU20 258 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 RBKSQ9H477 322 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 ZNF665Q9H7R5 613 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 CLCF1Q9UBD9 225 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 GAB2Q9UQC2 676 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 RTTNQ86VV8 2226 aa9.65□□□□□ -0.86
RFC4-214ENST00000494047 MKRN2OSH3BPM6 223 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 AQP7O14520 342 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 RHBDL1O75783 438 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 HPRT1P00492 218 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 HRASP01112 189 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 FAM87AP0C7U9 286 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 CFHR2P36980 270 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 NDUFA6P56556 154 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 ERVFRD-1P60508 538 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 P2RY6Q15077 328 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
RFC4-214ENST00000494047 LCN15Q6UWW0 184 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 ACP7Q6ZNF0 438 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 SLC16A13Q7RTY0 426 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 OR10G9Q8NGN4 311 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 OR10G7Q8NGN6 311 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 SLC25A40Q8TBP6 338 aa9.64□□□□□ -0.87
RFC4-214ENST00000494047 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms