RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 RGS11O94810 467 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 MPC2O95563 127 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 FSTL3O95633 263 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 LHBP01229 141 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 IGHV1-46P01743 117 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CRYGBP07316 175 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CTSDP07339 412 aaPredicted RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 FGF2P09038 288 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 HERV-K104P61576 105 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 RAB31Q13636 194 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 ST3GAL2Q16842 350 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 FAM74A1Q5RGS3 127 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF497Q6ZNH5 498 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 LRP11Q86VZ4 500 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CCDC71LQ8N9Z2 235 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CXorf58Q96LI9 332 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 PHB2Q99623 299 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 NKX6-2Q9C056 277 aaPredicted RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 FAM234AQ9H0X4 552 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 SMPXQ9UHP9 88 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 MEIKINA0A087WXM9 373 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 PPP1R2P9O14990 202 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 SPRY3O43610 288 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CFDP00746 253 aaPredicted RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 GIPP09681 153 aaPredicted RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 PET100P0DJ07 73 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 PGAM2P15259 253 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 RAP2BP61225 183 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 HLA-DRB3P79483 266 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 DAZAP2Q15038 168 aaPredicted RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 SPAG16Q8N0X2 631 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 OR52L2PQ8NGH6 319 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 MRPL30Q8TCC3 161 aaKnown RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 ITLN1Q8WWA0 313 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 MOB3AQ96BX8 217 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 TMEM204Q9BSN7 226 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 CABLES2Q9BTV7 478 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 MBNL3Q9NUK0 354 aaKnown RBP5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 TCF19Q9Y242 345 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 KCNIP3Q9Y2W7 256 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 FRYQ5TBA9 3013 aa5.6□□□□□ -1.51
FNDC3B-212ENST00000494000 HEATR1Q9H583 2144 aaKnown RBP5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 SVILO95425 2214 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 MGST3O14880 152 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 DUS4LO95620 317 aaKnown RBP5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 C4BPBP20851 252 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ZBTB25P24278 435 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 TFF3Q07654 80 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 MSMO1Q15800 293 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 MSMPQ1L6U9 139 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF660Q6AZW8 331 aaPredicted RBP5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 C22orf34Q6ZV56 151 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF383Q8NA42 475 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 OR2AK2Q8NG84 335 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 OR13D1Q8NGV5 346 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 COQ8AQ8NI60 647 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 RDH5Q92781 318 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF488Q96MN9 340 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 WDR13Q9H1Z4 485 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 DYNLRB1Q9NP97 96 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF230Q9UIE0 474 aaPredicted RBP5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 VSIG4Q9Y279 399 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 RTTNQ86VV8 2226 aa5.59□□□□□ -1.51
FNDC3B-212ENST00000494000 ANKRD11Q6UB99 2663 aaPredicted RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 TRAV38-1A0A0B4J264 116 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 NKX2-6A6NCS4 301 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 PPBPP02775 128 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF728P0DKX0 622 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 VSIG10L2P0DP72 767 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 PVALBP20472 110 aaPredicted RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 AKR1C3P42330 323 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 PPOXP50336 477 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 RND3P61587 244 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 SRPXP78539 464 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 IL13RA1P78552 427 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 CYCSP99999 105 aaKnown RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 DEFA5Q01523 94 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 FCN2Q15485 313 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF672Q499Z4 452 aaPredicted RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 AADACL3Q5VUY0 350 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 TEX36Q5VZQ5 186 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 TMED4Q7Z7H5 227 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 SGPP2Q8IWX5 399 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 KIRREL1Q96J84 757 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 TSNAXQ99598 290 aaKnown RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 HDHD3Q9BSH5 251 aaPredicted RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF436Q9C0F3 470 aaPredicted RBP5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 GCM1Q9NP62 436 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF222Q9UK12 451 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 TRAPPC2LQ9UL33 140 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 MMP24Q9Y5R2 645 aa5.59□□□□□ -1.52
FNDC3B-212ENST00000494000 PIEZO1Q92508 2521 aa5.58□□□□□ -1.52
FNDC3B-212ENST00000494000 LOC102724200A0A096LPH7 203 aaPredicted RBP5.58□□□□□ -1.52
FNDC3B-212ENST00000494000 E7EQL1 145 aa5.58□□□□□ -1.52
FNDC3B-212ENST00000494000 SIRPB1O00241 398 aa5.58□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF207O43670 478 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms