RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PPP1R27Q86WC6 154 aa10.63□□□□□ -0.71
IRF1-210ENST00000493208 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
IRF1-210ENST00000493208 SPARTQ8N0X7 666 aa10.63□□□□□ -0.71
IRF1-210ENST00000493208 MINDY2Q8NBR6 621 aa10.63□□□□□ -0.71
IRF1-210ENST00000493208 ARPC1AQ92747 370 aa10.63□□□□□ -0.71
IRF1-210ENST00000493208 MRPS7Q9Y2R9 242 aaKnown RBP10.63□□□□□ -0.71
IRF1-210ENST00000493208 MFNGO00587 321 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 SHOXO15266 292 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 ACTL6BO94805 426 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 PPIFP30405 207 aaKnown RBP10.62□□□□□ -0.71
IRF1-210ENST00000493208 MOGAT2Q3SYC2 334 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 ZNF773Q6PK81 442 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 GLDNQ6ZMI3 551 aaPredicted RBP10.62□□□□□ -0.71
IRF1-210ENST00000493208 ZNF429Q86V71 674 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 HARBI1Q96MB7 349 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.62□□□□□ -0.71
IRF1-210ENST00000493208 ZNF355PQ9NSJ1 428 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 TXNL4BQ9NX01 149 aaKnown RBP10.62□□□□□ -0.71
IRF1-210ENST00000493208 PRELID3BQ9Y3B1 194 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 ETV7Q9Y603 341 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 A3GALT2U3KPV4 340 aa10.62□□□□□ -0.71
IRF1-210ENST00000493208 A0A0A6YYH2 397 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 A6NJ64 397 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 LINC01619G3V211 115 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 G3V318 75 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 RAB27BO00194 218 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 CNTFRP26992 372 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 LUMP51884 338 aaPredicted RBP10.61□□□□□ -0.71
IRF1-210ENST00000493208 OR10A3P58181 314 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 FHL3Q13643 280 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 PSG5Q15238 335 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 DEFB136Q30KP8 78 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 ZNF260Q3ZCT1 412 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 DRAXINQ8NBI3 349 aaPredicted RBP10.61□□□□□ -0.71
IRF1-210ENST00000493208 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 PHB2Q99623 299 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 AIFM2Q9BRQ8 373 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 ELOVL1Q9BW60 279 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 DAPK2Q9UIK4 370 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 RRP15Q9Y3B9 282 aaKnown RBP10.61□□□□□ -0.71
IRF1-210ENST00000493208 CMYA5Q8N3K9 4069 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 TGP01266 2768 aa10.61□□□□□ -0.71
IRF1-210ENST00000493208 SLC25A17O43808 307 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 CA2P00918 260 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
IRF1-210ENST00000493208 GSTT2P0CG29 244 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 GSTT2BP0CG30 244 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 AADACP22760 399 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 TPPP2P59282 170 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 ARPC4P59998 168 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 FXYD3Q14802 87 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 CDNFQ49AH0 187 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 FAM209BQ5JX69 171 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
IRF1-210ENST00000493208 BORCS5Q969J3 196 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 RITA1Q96K30 269 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 CLCC1Q96S66 551 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 ST6GALNAC5Q9BVH7 336 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 SDHAF2Q9NX18 166 aa10.6□□□□□ -0.71
IRF1-210ENST00000493208 I3L521 148 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 K7EIL1 84 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 OVOL1O14753 267 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 MPPED1O15442 326 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
IRF1-210ENST00000493208 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
IRF1-210ENST00000493208 ZP3P21754 424 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 ECI1P42126 302 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 GNB1P62873 340 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 KCTD21Q4G0X4 260 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 IGSF11Q5DX21 431 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 CNIH2Q6PI25 160 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 ZNF645Q8N7E2 425 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 LFNGQ8NES3 379 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 OR6Q1Q8NGQ2 317 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 GRPEL2Q8TAA5 225 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 B9D2Q9BPU9 175 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 DCUN1D5Q9BTE7 237 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
IRF1-210ENST00000493208 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 LY86O95711 162 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 TRGV3P03979 118 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 IGKV1-16P04430 117 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 CBX5P45973 191 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 C5orf24Q7Z6I8 188 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 TEX45Q8NA69 505 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms