RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SOHLH1Q5JUK2 328 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 VMO1Q7Z5L0 202 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 SUMF2Q8NBJ7 301 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 CCDC54Q8NEL0 328 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 CFHR4Q92496 578 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 CHST6Q9GZX3 395 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 RNF7Q9UBF6 113 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 GRHPRQ9UBQ7 328 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 GAB2Q9UQC2 676 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 COA3Q9Y2R0 106 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-213ENST00000492506 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 MEGF11A6BM72 1044 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 CDC42EP2O14613 210 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HSPA12AO43301 675 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 SLC16A7O60669 478 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 MRPL3P09001 348 aaKnown RBP10.72□□□□□ -0.69
HDAC3-213ENST00000492506 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 RAB6AP20340 208 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 RPL4P36578 427 aaKnown RBP10.72□□□□□ -0.69
HDAC3-213ENST00000492506 EFNB2P52799 333 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 OXLD1Q5BKU9 147 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 COA6Q5JTJ3 125 aaKnown RBP10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-213ENST00000492506 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 FGFRL1Q8N441 504 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 PPP1R14AQ96A00 147 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 C2orf50Q96LR7 162 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 HCAR1Q9BXC0 346 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 SLC25A31Q9H0C2 315 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 ARV1Q9H2C2 271 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 TMEM242Q9NWH2 141 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 RPUSD1Q9UJJ7 312 aaKnown RBP10.72□□□□□ -0.69
HDAC3-213ENST00000492506 SIGLEC9Q9Y336 463 aa10.72□□□□□ -0.69
HDAC3-213ENST00000492506 A0A1W2PN81 502 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 A0A1W2PPE2 198 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 OOEPA6NGQ2 149 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 GYPAP02724 150 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 CD37P11049 281 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 CHRNA7P36544 502 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
HDAC3-213ENST00000492506 PPP1R1AQ13522 171 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 SCGB2B2Q4G0G5 96 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 SLC35E3Q7Z769 313 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 FAM90A1Q86YD7 464 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF573Q86YE8 665 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 PPP1R35Q8TAP8 253 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 NPRL2Q8WTW4 380 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 ISOC2Q96AB3 205 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 SEH1LQ96EE3 360 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 ACY3Q96HD9 319 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 SEC22AQ96IW7 307 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 RNF126Q9BV68 326 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 PRO1933Q9H354 126 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 CNTD2Q9H8S5 307 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 MED20Q9H944 212 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 AURKAIP1Q9NWT8 199 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-213ENST00000492506 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 SIGLEC7Q9Y286 467 aa10.71□□□□□ -0.69
HDAC3-213ENST00000492506 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
HDAC3-213ENST00000492506 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 A0A1W2PPK0 400 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 XKRYO14609 159 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 TK1P04183 234 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 CA6P23280 308 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 DLX1P56177 255 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-213ENST00000492506 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-213ENST00000492506 OR8B8Q15620 311 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 MEP1BQ16820 701 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 VAX1Q5SQQ9 334 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 DUX4L9Q6RFH8 374 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-213ENST00000492506 GCSAMQ8N6F7 178 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 GJC3Q8NFK1 279 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 EIF5A2Q9GZV4 153 aaKnown RBP10.7□□□□□ -0.7
HDAC3-213ENST00000492506 NECAP2Q9NVZ3 263 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 GTF2A1LQ9UNN4 478 aa10.7□□□□□ -0.7
HDAC3-213ENST00000492506 K7EPK0 472 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 PHOX2AO14813 284 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 NPFFO15130 113 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 LHBP01229 141 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 FABP4P15090 132 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 ANOS1P23352 680 aa10.69□□□□□ -0.7
HDAC3-213ENST00000492506 TMEM128Q5BJH2 165 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms