RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 OR13A1Q8NGR1 328 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SPSB4Q96A44 273 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 FUT9Q9Y231 359 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SMIM6P0DI80 62 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 TMEM241Q24JQ0 296 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ZNF585BQ52M93 769 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SMPD2O60906 423 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 BCL2L2Q92843 193 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 RAB24Q969Q5 203 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 MEGF10Q96KG7 1140 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SPINT2O43291 252 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SOD3P08294 240 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 APELAP0DMC3 54 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 BSXQ3C1V8 233 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 PYY3Q5JQD4 70 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 COLCA1Q6ZS62 124 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ZCCHC24Q8N2G6 241 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 LOC102723971A0A1B0GUV8 181 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 GALR1P47211 349 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SLC35B1P78383 322 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 GAMTQ14353 236 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 PRR31Q5SQ13 230 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 FAM78BQ5VT40 261 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ODF3L1Q8IXM7 274 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
TNFRSF1B-203ENST00000492361 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ERVK-16P61578 105 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 PINX1Q96BK5 328 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 RNF115Q9Y4L5 304 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 BTBD17A6NE02 478 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 IGKV1D-33P01593 117 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 IGKV1-33P01594 117 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 MOGAT3Q86VF5 341 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 METTL1Q9UBP6 276 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 VAX2Q9UIW0 290 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 IGF2RP11717 2491 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 UBE2CO00762 179 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 MYOD1P15172 320 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 RND1Q92730 232 aa12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 WDR61Q9GZS3 305 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-203ENST00000492361 XKRY2A2RUG3 117 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 IFNL4K9M1U5 179 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ACP1P24666 158 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 TMEM45BQ96B21 275 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 ANKRD11Q6UB99 2663 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF1B-203ENST00000492361 NDUFB4O95168 129 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 COX5AP20674 150 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 B2MP61769 119 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 LYG1Q8N1E2 194 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 R3HDM4Q96D70 268 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ACTR3CQ9C0K3 210 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ENY2Q9NPA8 101 aa12.77□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 SCGB1D1O95968 90 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 NDUFB7P17568 137 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 CD33P20138 364 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZNF718Q3SXZ3 478 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 TMEM41BQ5BJD5 291 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 PACRGQ96M98 296 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 REG1BP48304 166 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 BATFQ16520 125 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 MIC13Q5XKP0 118 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 Q6P435 159 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZPBPQ9BS86 351 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 DERL1Q9BUN8 251 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 PARLQ9H300 379 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 SERTAD4Q9NUC0 356 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 GPR87Q9BY21 358 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
TNFRSF1B-203ENST00000492361 ZNRD1Q9P1U0 126 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms