RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-220ENST00000492280 LFNGQ8NES3 379 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 ITLN1Q8WWA0 313 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 ABCA1O95477 2261 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 C1QTNF9BB2RNN3 333 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 FCGR3BO75015 233 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 DFFBO76075 338 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF134P52741 427 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 SLC35E4Q6ICL7 350 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 MMP9P14780 707 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 PTAFRP25105 342 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 TAGLN2P37802 199 aaKnown RBP10.36□□□□□ -0.75
HMGN1-220ENST00000492280 DLK1P80370 383 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 ACSM6Q6P461 480 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF429Q86V71 674 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 Q8TCH9 128 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 DYSFO75923 2080 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 TANC2Q9HCD6 1990 aa10.36□□□□□ -0.75
HMGN1-220ENST00000492280 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 MARCH11A6NNE9 402 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF737O75373 536 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 OR9G9P0C7N8 305 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 C15orf54Q8N8G6 183 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 AGMATQ9BSE5 352 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 WDR61Q9GZS3 305 aaKnown RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 LRRC30A6NM36 301 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF891A8MT65 544 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 C15orf65H3BRN8 121 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 OR2C1O95371 312 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 CYB5R3P00387 301 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 RAB5AP20339 215 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 MDKP21741 143 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 TLE4Q04727 773 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 PRSS33Q8NF86 280 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 DTD1Q8TEA8 209 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 C12orf57Q99622 126 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 AHRRA9YTQ3 701 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 M0R1X1 148 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 RAB5BP61020 215 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 RPP25LQ8N5L8 163 aaKnown RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 C1orf162Q8NEQ5 155 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGN1-220ENST00000492280 SSX3Q99909 188 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
HMGN1-220ENST00000492280 AKAP6Q13023 2319 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MAP1LC3B2A6NCE7 125 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 C1orf196B1AJZ1 125 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 CXCL1P09341 107 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 SLC25A6P12236 298 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 CEACAM1P13688 526 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MYOD1P15172 320 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 NQO2P16083 231 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 GPR12P47775 334 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 HBG1P69891 147 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 HBG2P69892 147 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 CATR1Q13166 79 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 RBMXL3Q8N7X1 1067 aaKnown RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MRPL37Q9BZE1 423 aaKnown RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MAP1LC3BQ9GZQ8 125 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MBD3L3A6NE82 208 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 SOX15O60248 233 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF674Q2M3X9 581 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF506Q5JVG8 444 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MBNL2Q5VZF2 373 aaKnown RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 SP5Q6BEB4 398 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 SLC16A13Q7RTY0 426 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 MBD3L2Q8NHZ7 208 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-220ENST00000492280 HSPB7Q9UBY9 170 aa10.34□□□□□ -0.75
HMGN1-220ENST00000492280 TGIF2-C20orf24A0A0A6YYL0 155 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 ZNF98A6NK75 572 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 RNF212BA8MTL3 300 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 SPINT2O43291 252 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 CRYAAP02489 173 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 P0C879 139 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 FGF7P21781 194 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 RPS10P46783 165 aaKnown RBP10.33□□□□□ -0.76
HMGN1-220ENST00000492280 GNG10P50151 68 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 ANKHD1Q8IWZ3 2542 aaKnown RBP10.33□□□□□ -0.76
HMGN1-220ENST00000492280 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 S100A6P06703 90 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 KLF3P57682 345 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-220ENST00000492280 P2RY6Q15077 328 aa10.33□□□□□ -0.76
HMGN1-220ENST00000492280 EIF2S3LQ2VIR3 472 aaKnown RBP10.33□□□□□ -0.76
HMGN1-220ENST00000492280 NCMAPQ5T1S8 102 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms