RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 TSPAN15O95858 294 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 HPRT1P00492 218 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 DUTP33316 252 aaKnown RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 KIR2DS2P43631 304 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 CAMLGP49069 296 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 UBE2KP61086 200 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 PEA15Q15121 130 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 ADIPOQQ15848 244 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 C17orf58Q2M2W7 97 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 CLEC9AQ6UXN8 241 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 OR52E5Q8NH55 327 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 RNASE11Q8TAA1 199 aaKnown RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 C17orf50Q8WW18 174 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 CIB3Q96Q77 187 aaPredicted RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 NKX6-2Q9C056 277 aaPredicted RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 CLN8Q9UBY8 286 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 TIMM9Q9Y5J7 89 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.99
USP4-214ENST00000491791 LRBAP50851 2863 aa8.9□□□□□ -0.99
USP4-214ENST00000491791 ZNF729A6NN14 1252 aaPredicted RBP8.89□□□□□ -0.99
USP4-214ENST00000491791 SIGLEC5O15389 551 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 ZG16O60844 167 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 RAMP3O60896 148 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 NDUFS6O75380 124 aaKnown RBP8.89□□□□□ -0.99
USP4-214ENST00000491791 SNAPINO95295 136 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 COL8A1P27658 744 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 HBG1P69891 147 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 HBG2P69892 147 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 SERF2P84101 59 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 EFNB3Q15768 340 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 LRRC75BQ2VPJ9 315 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 DHRS7BQ6IAN0 325 aaPredicted RBP8.89□□□□□ -0.99
USP4-214ENST00000491791 ATRAIDQ6UW56 229 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 HAPLN4Q86UW8 402 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 ZNF525Q8N782 197 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 ZNF439Q8NDP4 499 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 UBALD1Q8TB05 177 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 DDB2Q92466 427 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 RND1Q92730 232 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 SH3BGRL3Q9H299 93 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 KCNJ16Q9NPI9 418 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 GFOD1Q9NXC2 390 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 CALYQ9NYX4 217 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 PSENENQ9NZ42 101 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 KPTNQ9Y664 436 aa8.89□□□□□ -0.99
USP4-214ENST00000491791 PRR14LQ5THK1 2151 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 LINC00473A8K010 186 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 PMS2P5A8MQ11 134 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 F8W036 122 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 CST7O76096 145 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 IFNA5P01569 189 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 TFF1P04155 84 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 OR4A8P0C604 315 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 EPHA1P21709 976 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 PAX6P26367 422 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 HOXA4Q00056 320 aaPredicted RBP8.88□□□□□ -0.99
USP4-214ENST00000491791 DEFA5Q01523 94 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 BSPH1Q075Z2 132 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 CLINT1Q14677 625 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 GUCA2BQ16661 112 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 GUK1Q16774 197 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 VWC2Q2TAL6 325 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 NCMAPQ5T1S8 102 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 SPSB3Q6PJ21 355 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 TCTEX1D2Q8WW35 142 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 ADTRPQ96IZ2 230 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 DCTN5Q9BTE1 182 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 MS4A7Q9GZW8 240 aaPredicted RBP8.88□□□□□ -0.99
USP4-214ENST00000491791 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 PSG11Q9UQ72 335 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 POLEQ07864 2286 aa8.88□□□□□ -0.99
USP4-214ENST00000491791 TEP1Q99973 2627 aaKnown RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 IGHV3OR15-7A0A075B7D8 119 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 TRAV38-1A0A0B4J264 116 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 LOC105371267A0A1B0GV96 52 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 C9JQL5 133 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 SOX15O60248 233 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 S1PR2O95136 353 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 KRASP01116 189 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 HBE1P02100 147 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 PRH1P02810 166 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 IRF2P14316 349 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 ZNF16P17020 682 aaPredicted RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 MDKP21741 143 aaPredicted RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 OMGP23515 440 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 CA7P43166 264 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 GPR12P47775 334 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms