RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PGLYRP3Q96LB9 341 aa9.97□□□□□ -0.81
USF1-206ENST00000491629 RNF5Q99942 180 aa9.97□□□□□ -0.81
USF1-206ENST00000491629 PIPOXQ9P0Z9 390 aa9.97□□□□□ -0.81
USF1-206ENST00000491629 H3BUA1 57 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 SLC25A17O43808 307 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 WBP4O75554 376 aaKnown RBP9.96□□□□□ -0.82
USF1-206ENST00000491629 LY6G6CO95867 125 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 NAPSAO96009 420 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 IGLV2-23P01705 113 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 CRYGBP07316 175 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 MC5RP33032 325 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
USF1-206ENST00000491629 Q499Y3 187 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 SVOPQ8N4V2 548 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 ZFP41Q8N8Y5 198 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 PYDC1Q8WXC3 89 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 FAAP24Q9BTP7 215 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 TINAGL1Q9GZM7 467 aaPredicted RBP9.96□□□□□ -0.82
USF1-206ENST00000491629 C11orf54Q9H0W9 315 aaPredicted RBP9.96□□□□□ -0.82
USF1-206ENST00000491629 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
USF1-206ENST00000491629 CLEC2DQ9UHP7 191 aa9.96□□□□□ -0.82
USF1-206ENST00000491629 CCDC160A6NGH7 325 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 CD40LGP29965 261 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 MOGAT2Q3SYC2 334 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 OR10K2Q6IF99 312 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 C6orf201Q7Z4U5 140 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 CBR4Q8N4T8 237 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
USF1-206ENST00000491629 BVESQ8NE79 360 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 SLC29A1Q99808 456 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 KCNK15Q9H427 330 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 BABAM2Q9NXR7 383 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 OR1A1Q9P1Q5 309 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 RPL36Q9Y3U8 105 aaKnown RBP9.95□□□□□ -0.82
USF1-206ENST00000491629 ORC6Q9Y5N6 252 aa9.95□□□□□ -0.82
USF1-206ENST00000491629 A0A0G2JLM5 398 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 BMPR1BO00238 502 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 ITGB1BP1O14713 200 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 RGS13O14921 159 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 OR2A4O95047 310 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 SPDEFO95238 335 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 AQP4P55087 323 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 RPS16P62249 146 aaKnown RBP9.94□□□□□ -0.82
USF1-206ENST00000491629 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 Q96MT0 163 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 NICN1Q9BSH3 213 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 SRD5A3Q9H8P0 318 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 STEAP1Q9UHE8 339 aa9.94□□□□□ -0.82
USF1-206ENST00000491629 A0A0A6YYD4 124 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 APELAP0DMC3 54 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 CPEP16870 476 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 HTR2CP28335 458 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 RGS21Q2M5E4 152 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 RPEL1Q2QD12 228 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 ZFP1Q6P2D0 407 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 LINC00299Q6ZSB3 139 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 CENPSQ8N2Z9 138 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 OR2K2Q8NGT1 345 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 DERL3Q96Q80 235 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 TSNAXQ99598 290 aaKnown RBP9.93□□□□□ -0.82
USF1-206ENST00000491629 HDHD3Q9BSH5 251 aaPredicted RBP9.93□□□□□ -0.82
USF1-206ENST00000491629 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 CKLFQ9UBR5 152 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 DMRT1Q9Y5R6 373 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 SELENOKQ9Y6D0 94 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 DNAH6Q9C0G6 4158 aa9.93□□□□□ -0.82
USF1-206ENST00000491629 IGKV1-6A0A0C4DH72 117 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 LOC100130705A0A1B0GUX0 176 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 SRRM4A7MD48 611 aaKnown RBP9.92□□□□□ -0.82
USF1-206ENST00000491629 DCKP27707 260 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 CAPGP40121 348 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 CEACAM6P40199 344 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 EIF2B2P49770 351 aaKnown RBP9.92□□□□□ -0.82
USF1-206ENST00000491629 ZNF45Q02386 682 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 UNC119Q13432 240 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 DEFB114Q30KQ6 69 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 YIF1BQ5BJH7 314 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 LAX1Q8IWV1 398 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 ADAD2Q8NCV1 583 aaKnown RBP9.92□□□□□ -0.82
USF1-206ENST00000491629 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 ZC4H2Q9NQZ6 224 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 ABRACLQ9P1F3 81 aa9.92□□□□□ -0.82
USF1-206ENST00000491629 CNIH1O95406 144 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 AADACP22760 399 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 RPS27AP62979 156 aaKnown RBP9.91□□□□□ -0.82
USF1-206ENST00000491629 PMS2P11Q13670 270 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 TMPRSS11AQ6ZMR5 421 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 PDPNQ86YL7 162 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 PQLC1Q8N2U9 271 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 PTX4Q96A99 478 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 WDR89Q96FK6 387 aaPredicted RBP9.91□□□□□ -0.82
USF1-206ENST00000491629 AKIP1Q9NQ31 210 aa9.91□□□□□ -0.82
USF1-206ENST00000491629 DIMT1Q9UNQ2 313 aaKnown RBP9.91□□□□□ -0.82
USF1-206ENST00000491629 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
USF1-206ENST00000491629 PNMA8CA0A1B0GUJ8 204 aa9.9□□□□□ -0.82
USF1-206ENST00000491629 DEDDO75618 318 aa9.9□□□□□ -0.82
USF1-206ENST00000491629 PRH1P02810 166 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms